Cargando…
The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis
Hepatocellular carcinoma (HCC) is one of the most common cancer in these days. Besides, N6-methyladenosine (m6A) plays an important role in the occurrence and development of hepatocellular carcinoma. Meanwhile, it is known to us that long noncoding RNAs (lncRNA) have the capability to control the ex...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9581679/ https://www.ncbi.nlm.nih.gov/pubmed/36276996 http://dx.doi.org/10.1155/2022/1395557 |
_version_ | 1784812679732396032 |
---|---|
author | Du, Shengwei Guo, Ying Huang, Jian Xu, Jiajia Chen, Guorong |
author_facet | Du, Shengwei Guo, Ying Huang, Jian Xu, Jiajia Chen, Guorong |
author_sort | Du, Shengwei |
collection | PubMed |
description | Hepatocellular carcinoma (HCC) is one of the most common cancer in these days. Besides, N6-methyladenosine (m6A) plays an important role in the occurrence and development of hepatocellular carcinoma. Meanwhile, it is known to us that long noncoding RNAs (lncRNA) have the capability to control the expression of genes which means some lncRNA can adjust the expression of some m6A.Thus, it is indispensable to dig the m6A-related lncRNA in hepatocellular carcinoma about its potential regulatory mechanism and immune analysis as well as its potential drugs. In this experiment, expression profile and clinical information of lncRNA are obtained by downloading the liver cancer data set from The Cancer Genome Atlas (TCGA) database. GO enrichment analysis is used to predict potential regulatory mechanism of lncRNA. Correlation analysis of clinical parameters are calculated via chisq.test. The Cox regression model is used in univariate and multivariate analysis, and the difference is statistically significant when P < 0.05. The results show that many kinds of lncRNA have influence on the prognosis of patients with HCC, and enrichment analysis discloses some pathways that can be used to evaluate mechanism underlying in HCC. The screening of targeted drugs can provide new clues for further experiments and clinical treatment. |
format | Online Article Text |
id | pubmed-9581679 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-95816792022-10-20 The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis Du, Shengwei Guo, Ying Huang, Jian Xu, Jiajia Chen, Guorong Comput Math Methods Med Review Article Hepatocellular carcinoma (HCC) is one of the most common cancer in these days. Besides, N6-methyladenosine (m6A) plays an important role in the occurrence and development of hepatocellular carcinoma. Meanwhile, it is known to us that long noncoding RNAs (lncRNA) have the capability to control the expression of genes which means some lncRNA can adjust the expression of some m6A.Thus, it is indispensable to dig the m6A-related lncRNA in hepatocellular carcinoma about its potential regulatory mechanism and immune analysis as well as its potential drugs. In this experiment, expression profile and clinical information of lncRNA are obtained by downloading the liver cancer data set from The Cancer Genome Atlas (TCGA) database. GO enrichment analysis is used to predict potential regulatory mechanism of lncRNA. Correlation analysis of clinical parameters are calculated via chisq.test. The Cox regression model is used in univariate and multivariate analysis, and the difference is statistically significant when P < 0.05. The results show that many kinds of lncRNA have influence on the prognosis of patients with HCC, and enrichment analysis discloses some pathways that can be used to evaluate mechanism underlying in HCC. The screening of targeted drugs can provide new clues for further experiments and clinical treatment. Hindawi 2022-10-12 /pmc/articles/PMC9581679/ /pubmed/36276996 http://dx.doi.org/10.1155/2022/1395557 Text en Copyright © 2022 Shengwei Du et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Article Du, Shengwei Guo, Ying Huang, Jian Xu, Jiajia Chen, Guorong The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title | The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title_full | The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title_fullStr | The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title_full_unstemmed | The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title_short | The Expressions and Functions of lncRNA Related to m6A in Hepatocellular Carcinoma from a Bioinformatics Analysis |
title_sort | expressions and functions of lncrna related to m6a in hepatocellular carcinoma from a bioinformatics analysis |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9581679/ https://www.ncbi.nlm.nih.gov/pubmed/36276996 http://dx.doi.org/10.1155/2022/1395557 |
work_keys_str_mv | AT dushengwei theexpressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT guoying theexpressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT huangjian theexpressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT xujiajia theexpressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT chenguorong theexpressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT dushengwei expressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT guoying expressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT huangjian expressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT xujiajia expressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis AT chenguorong expressionsandfunctionsoflncrnarelatedtom6ainhepatocellularcarcinomafromabioinformaticsanalysis |