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Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes
Age-related macular degeneration is the leading cause of vision loss in developed countries, and wet-type AMD requires urgent treatment and rapid diagnosis because it causes rapid irreversible vision loss. Currently, AMD diagnosis is mainly carried out using images obtained by optical coherence tomo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582110/ https://www.ncbi.nlm.nih.gov/pubmed/35513586 http://dx.doi.org/10.1007/s10278-022-00643-6 |
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author | López-Varela, Emilio Vidal, Plácido L. Pascual, Nuria Olivier Novo, Jorge Ortega, Marcos |
author_facet | López-Varela, Emilio Vidal, Plácido L. Pascual, Nuria Olivier Novo, Jorge Ortega, Marcos |
author_sort | López-Varela, Emilio |
collection | PubMed |
description | Age-related macular degeneration is the leading cause of vision loss in developed countries, and wet-type AMD requires urgent treatment and rapid diagnosis because it causes rapid irreversible vision loss. Currently, AMD diagnosis is mainly carried out using images obtained by optical coherence tomography. This diagnostic process is performed by human clinicians, so human error may occur in some cases. Therefore, fully automatic methodologies are highly desirable adding a layer of robustness to the diagnosis. In this work, a novel computer-aided diagnosis and visualization methodology is proposed for the rapid identification and visualization of wet AMD. We adapted a convolutional neural network for segmentation of a similar domain of medical images to the problem of wet AMD segmentation, taking advantage of transfer learning, which allows us to work with and exploit a reduced number of samples. We generate a 3D intuitive visualization where the existence, position and severity of the fluid were represented in a clear and intuitive way to facilitate the analysis of the clinicians. The 3D visualization is robust and accurate, obtaining satisfactory 0.949 and 0.960 Dice coefficients in the different evaluated OCT cube configurations, allowing to quickly assess the presence and extension of the fluid associated to wet AMD. |
format | Online Article Text |
id | pubmed-9582110 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-95821102022-10-21 Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes López-Varela, Emilio Vidal, Plácido L. Pascual, Nuria Olivier Novo, Jorge Ortega, Marcos J Digit Imaging Article Age-related macular degeneration is the leading cause of vision loss in developed countries, and wet-type AMD requires urgent treatment and rapid diagnosis because it causes rapid irreversible vision loss. Currently, AMD diagnosis is mainly carried out using images obtained by optical coherence tomography. This diagnostic process is performed by human clinicians, so human error may occur in some cases. Therefore, fully automatic methodologies are highly desirable adding a layer of robustness to the diagnosis. In this work, a novel computer-aided diagnosis and visualization methodology is proposed for the rapid identification and visualization of wet AMD. We adapted a convolutional neural network for segmentation of a similar domain of medical images to the problem of wet AMD segmentation, taking advantage of transfer learning, which allows us to work with and exploit a reduced number of samples. We generate a 3D intuitive visualization where the existence, position and severity of the fluid were represented in a clear and intuitive way to facilitate the analysis of the clinicians. The 3D visualization is robust and accurate, obtaining satisfactory 0.949 and 0.960 Dice coefficients in the different evaluated OCT cube configurations, allowing to quickly assess the presence and extension of the fluid associated to wet AMD. Springer International Publishing 2022-05-05 2022-10 /pmc/articles/PMC9582110/ /pubmed/35513586 http://dx.doi.org/10.1007/s10278-022-00643-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article López-Varela, Emilio Vidal, Plácido L. Pascual, Nuria Olivier Novo, Jorge Ortega, Marcos Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title | Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title_full | Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title_fullStr | Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title_full_unstemmed | Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title_short | Fully-Automatic 3D Intuitive Visualization of Age-Related Macular Degeneration Fluid Accumulations in OCT Cubes |
title_sort | fully-automatic 3d intuitive visualization of age-related macular degeneration fluid accumulations in oct cubes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582110/ https://www.ncbi.nlm.nih.gov/pubmed/35513586 http://dx.doi.org/10.1007/s10278-022-00643-6 |
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