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Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains

We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hund...

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Autores principales: Sanaat, Amirhossein, Akhavanalaf, Azadeh, Shiri, Isaac, Salimi, Yazdan, Arabi, Hossein, Zaidi, Habib
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582376/
https://www.ncbi.nlm.nih.gov/pubmed/36087092
http://dx.doi.org/10.1002/hbm.26068
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author Sanaat, Amirhossein
Akhavanalaf, Azadeh
Shiri, Isaac
Salimi, Yazdan
Arabi, Hossein
Zaidi, Habib
author_facet Sanaat, Amirhossein
Akhavanalaf, Azadeh
Shiri, Isaac
Salimi, Yazdan
Arabi, Hossein
Zaidi, Habib
author_sort Sanaat, Amirhossein
collection PubMed
description We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hundred forty clinical brain (18)F‐FDG PET/CT scans were collected to generate TOF and non‐TOF sinograms. The TOF sinograms were split into seven time bins (0, ±1, ±2, ±3). The predicted TOF sinogram was reconstructed and the performance of both models (IS and SS) compared with reference TOF and non‐TOF. Wide‐ranging quantitative and statistical analysis metrics, including structural similarity index metric (SSIM), root mean square error (RMSE), as well as 28 radiomic features for 83 brain regions were extracted to evaluate the performance of the CycleGAN model. SSIM and RMSE of 0.99 ± 0.03, 0.98 ± 0.02 and 0.12 ± 0.09, 0.16 ± 0.04 were achieved for the generated TOF‐PET images in IS and SS, respectively. They were 0.97 ± 0.03 and 0.22 ± 0.12, respectively, for non‐TOF‐PET images. The Bland & Altman analysis revealed that the lowest tracer uptake value bias (−0.02%) and minimum variance (95% CI: −0.17%, +0.21%) were achieved for TOF‐PET images generated in IS. For malignant lesions, the contrast in the test dataset was enhanced from 3.22 ± 2.51 for non‐TOF to 3.34 ± 0.41 and 3.65 ± 3.10 for TOF PET in SS and IS, respectively. The implemented CycleGAN is capable of generating TOF from non‐TOF PET images to achieve better image quality.
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spelling pubmed-95823762022-10-21 Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains Sanaat, Amirhossein Akhavanalaf, Azadeh Shiri, Isaac Salimi, Yazdan Arabi, Hossein Zaidi, Habib Hum Brain Mapp Research Articles We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hundred forty clinical brain (18)F‐FDG PET/CT scans were collected to generate TOF and non‐TOF sinograms. The TOF sinograms were split into seven time bins (0, ±1, ±2, ±3). The predicted TOF sinogram was reconstructed and the performance of both models (IS and SS) compared with reference TOF and non‐TOF. Wide‐ranging quantitative and statistical analysis metrics, including structural similarity index metric (SSIM), root mean square error (RMSE), as well as 28 radiomic features for 83 brain regions were extracted to evaluate the performance of the CycleGAN model. SSIM and RMSE of 0.99 ± 0.03, 0.98 ± 0.02 and 0.12 ± 0.09, 0.16 ± 0.04 were achieved for the generated TOF‐PET images in IS and SS, respectively. They were 0.97 ± 0.03 and 0.22 ± 0.12, respectively, for non‐TOF‐PET images. The Bland & Altman analysis revealed that the lowest tracer uptake value bias (−0.02%) and minimum variance (95% CI: −0.17%, +0.21%) were achieved for TOF‐PET images generated in IS. For malignant lesions, the contrast in the test dataset was enhanced from 3.22 ± 2.51 for non‐TOF to 3.34 ± 0.41 and 3.65 ± 3.10 for TOF PET in SS and IS, respectively. The implemented CycleGAN is capable of generating TOF from non‐TOF PET images to achieve better image quality. John Wiley & Sons, Inc. 2022-09-10 /pmc/articles/PMC9582376/ /pubmed/36087092 http://dx.doi.org/10.1002/hbm.26068 Text en © 2022 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Sanaat, Amirhossein
Akhavanalaf, Azadeh
Shiri, Isaac
Salimi, Yazdan
Arabi, Hossein
Zaidi, Habib
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title_full Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title_fullStr Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title_full_unstemmed Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title_short Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
title_sort deep‐tof‐pet: deep learning‐guided generation of time‐of‐flight from non‐tof brain pet images in the image and projection domains
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582376/
https://www.ncbi.nlm.nih.gov/pubmed/36087092
http://dx.doi.org/10.1002/hbm.26068
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