Cargando…
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains
We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hund...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582376/ https://www.ncbi.nlm.nih.gov/pubmed/36087092 http://dx.doi.org/10.1002/hbm.26068 |
_version_ | 1784812821674983424 |
---|---|
author | Sanaat, Amirhossein Akhavanalaf, Azadeh Shiri, Isaac Salimi, Yazdan Arabi, Hossein Zaidi, Habib |
author_facet | Sanaat, Amirhossein Akhavanalaf, Azadeh Shiri, Isaac Salimi, Yazdan Arabi, Hossein Zaidi, Habib |
author_sort | Sanaat, Amirhossein |
collection | PubMed |
description | We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hundred forty clinical brain (18)F‐FDG PET/CT scans were collected to generate TOF and non‐TOF sinograms. The TOF sinograms were split into seven time bins (0, ±1, ±2, ±3). The predicted TOF sinogram was reconstructed and the performance of both models (IS and SS) compared with reference TOF and non‐TOF. Wide‐ranging quantitative and statistical analysis metrics, including structural similarity index metric (SSIM), root mean square error (RMSE), as well as 28 radiomic features for 83 brain regions were extracted to evaluate the performance of the CycleGAN model. SSIM and RMSE of 0.99 ± 0.03, 0.98 ± 0.02 and 0.12 ± 0.09, 0.16 ± 0.04 were achieved for the generated TOF‐PET images in IS and SS, respectively. They were 0.97 ± 0.03 and 0.22 ± 0.12, respectively, for non‐TOF‐PET images. The Bland & Altman analysis revealed that the lowest tracer uptake value bias (−0.02%) and minimum variance (95% CI: −0.17%, +0.21%) were achieved for TOF‐PET images generated in IS. For malignant lesions, the contrast in the test dataset was enhanced from 3.22 ± 2.51 for non‐TOF to 3.34 ± 0.41 and 3.65 ± 3.10 for TOF PET in SS and IS, respectively. The implemented CycleGAN is capable of generating TOF from non‐TOF PET images to achieve better image quality. |
format | Online Article Text |
id | pubmed-9582376 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95823762022-10-21 Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains Sanaat, Amirhossein Akhavanalaf, Azadeh Shiri, Isaac Salimi, Yazdan Arabi, Hossein Zaidi, Habib Hum Brain Mapp Research Articles We aim to synthesize brain time‐of‐flight (TOF) PET images/sinograms from their corresponding non‐TOF information in the image space (IS) and sinogram space (SS) to increase the signal‐to‐noise ratio (SNR) and contrast of abnormalities, and decrease the bias in tracer uptake quantification. One hundred forty clinical brain (18)F‐FDG PET/CT scans were collected to generate TOF and non‐TOF sinograms. The TOF sinograms were split into seven time bins (0, ±1, ±2, ±3). The predicted TOF sinogram was reconstructed and the performance of both models (IS and SS) compared with reference TOF and non‐TOF. Wide‐ranging quantitative and statistical analysis metrics, including structural similarity index metric (SSIM), root mean square error (RMSE), as well as 28 radiomic features for 83 brain regions were extracted to evaluate the performance of the CycleGAN model. SSIM and RMSE of 0.99 ± 0.03, 0.98 ± 0.02 and 0.12 ± 0.09, 0.16 ± 0.04 were achieved for the generated TOF‐PET images in IS and SS, respectively. They were 0.97 ± 0.03 and 0.22 ± 0.12, respectively, for non‐TOF‐PET images. The Bland & Altman analysis revealed that the lowest tracer uptake value bias (−0.02%) and minimum variance (95% CI: −0.17%, +0.21%) were achieved for TOF‐PET images generated in IS. For malignant lesions, the contrast in the test dataset was enhanced from 3.22 ± 2.51 for non‐TOF to 3.34 ± 0.41 and 3.65 ± 3.10 for TOF PET in SS and IS, respectively. The implemented CycleGAN is capable of generating TOF from non‐TOF PET images to achieve better image quality. John Wiley & Sons, Inc. 2022-09-10 /pmc/articles/PMC9582376/ /pubmed/36087092 http://dx.doi.org/10.1002/hbm.26068 Text en © 2022 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles Sanaat, Amirhossein Akhavanalaf, Azadeh Shiri, Isaac Salimi, Yazdan Arabi, Hossein Zaidi, Habib Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title |
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title_full |
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title_fullStr |
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title_full_unstemmed |
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title_short |
Deep‐TOF‐PET: Deep learning‐guided generation of time‐of‐flight from non‐TOF brain PET images in the image and projection domains |
title_sort | deep‐tof‐pet: deep learning‐guided generation of time‐of‐flight from non‐tof brain pet images in the image and projection domains |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9582376/ https://www.ncbi.nlm.nih.gov/pubmed/36087092 http://dx.doi.org/10.1002/hbm.26068 |
work_keys_str_mv | AT sanaatamirhossein deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains AT akhavanalafazadeh deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains AT shiriisaac deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains AT salimiyazdan deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains AT arabihossein deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains AT zaidihabib deeptofpetdeeplearningguidedgenerationoftimeofflightfromnontofbrainpetimagesintheimageandprojectiondomains |