Cargando…

Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae

Mitochondrial genomes have widely been used as molecular markers in understanding the patterns and processes of nematode evolution. The species in genus Cruznema are free-living bacterivores as well as parasites of crickets and mollusks. The complete mitochondrial genome of C. tripartitum was determ...

Descripción completa

Detalles Bibliográficos
Autores principales: Du, Hongrui, Guo, Fan, Gao, Yuxia, Wang, Xuan, Qing, Xue, Li, Hongmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sciendo 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583413/
https://www.ncbi.nlm.nih.gov/pubmed/36338422
http://dx.doi.org/10.2478/jofnem-2022-0029
_version_ 1784813069412597760
author Du, Hongrui
Guo, Fan
Gao, Yuxia
Wang, Xuan
Qing, Xue
Li, Hongmei
author_facet Du, Hongrui
Guo, Fan
Gao, Yuxia
Wang, Xuan
Qing, Xue
Li, Hongmei
author_sort Du, Hongrui
collection PubMed
description Mitochondrial genomes have widely been used as molecular markers in understanding the patterns and processes of nematode evolution. The species in genus Cruznema are free-living bacterivores as well as parasites of crickets and mollusks. The complete mitochondrial genome of C. tripartitum was determined through high-throughput sequencing as the first sequenced representative of the genus Cruznema. The genome is comprised of 14,067 bp nucleotides, and includes 12 protein-coding, two rRNA, and 22 tRNA genes. Phylogenetic analyses based on amino acid data support C. tripartitum as a sister to the clade containing Caenorhabditis elegans and Oscheius chongmingensis. The analysis of gene arrangement suggested that C. tripartitum shares the same gene order with O. chongmingensis, Litoditis marina, Diplocapter coronatus, genus Caenorhabditis, and Pristionchus pacificus. Thus, the mitochondrial gene arrangement is highly conserved in the family Rhabditidae as well as some species in Diplogasteridae.
format Online
Article
Text
id pubmed-9583413
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Sciendo
record_format MEDLINE/PubMed
spelling pubmed-95834132022-11-03 Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae Du, Hongrui Guo, Fan Gao, Yuxia Wang, Xuan Qing, Xue Li, Hongmei J Nematol Research Paper Mitochondrial genomes have widely been used as molecular markers in understanding the patterns and processes of nematode evolution. The species in genus Cruznema are free-living bacterivores as well as parasites of crickets and mollusks. The complete mitochondrial genome of C. tripartitum was determined through high-throughput sequencing as the first sequenced representative of the genus Cruznema. The genome is comprised of 14,067 bp nucleotides, and includes 12 protein-coding, two rRNA, and 22 tRNA genes. Phylogenetic analyses based on amino acid data support C. tripartitum as a sister to the clade containing Caenorhabditis elegans and Oscheius chongmingensis. The analysis of gene arrangement suggested that C. tripartitum shares the same gene order with O. chongmingensis, Litoditis marina, Diplocapter coronatus, genus Caenorhabditis, and Pristionchus pacificus. Thus, the mitochondrial gene arrangement is highly conserved in the family Rhabditidae as well as some species in Diplogasteridae. Sciendo 2022-09-24 /pmc/articles/PMC9583413/ /pubmed/36338422 http://dx.doi.org/10.2478/jofnem-2022-0029 Text en © 2022 Du et al., published by Sciendo https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Paper
Du, Hongrui
Guo, Fan
Gao, Yuxia
Wang, Xuan
Qing, Xue
Li, Hongmei
Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title_full Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title_fullStr Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title_full_unstemmed Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title_short Complete Mitogenome of Cruznema Tripartitum Confirms Highly Conserved Gene Arrangement within Family Rhabditidae
title_sort complete mitogenome of cruznema tripartitum confirms highly conserved gene arrangement within family rhabditidae
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583413/
https://www.ncbi.nlm.nih.gov/pubmed/36338422
http://dx.doi.org/10.2478/jofnem-2022-0029
work_keys_str_mv AT duhongrui completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae
AT guofan completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae
AT gaoyuxia completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae
AT wangxuan completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae
AT qingxue completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae
AT lihongmei completemitogenomeofcruznematripartitumconfirmshighlyconservedgenearrangementwithinfamilyrhabditidae