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Multi-objective data enhancement for deep learning-based ultrasound analysis

Recently, Deep Learning based automatic generation of treatment recommendation has been attracting much attention. However, medical datasets are usually small, which may lead to over-fitting and inferior performances of deep learning models. In this paper, we propose multi-objective data enhancement...

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Autores principales: Piao, Chengkai, Lv, Mengyue, Wang, Shujie, Zhou, Rongyan, Wang, Yuchen, Wei, Jinmao, Liu, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583467/
https://www.ncbi.nlm.nih.gov/pubmed/36266626
http://dx.doi.org/10.1186/s12859-022-04985-4
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author Piao, Chengkai
Lv, Mengyue
Wang, Shujie
Zhou, Rongyan
Wang, Yuchen
Wei, Jinmao
Liu, Jian
author_facet Piao, Chengkai
Lv, Mengyue
Wang, Shujie
Zhou, Rongyan
Wang, Yuchen
Wei, Jinmao
Liu, Jian
author_sort Piao, Chengkai
collection PubMed
description Recently, Deep Learning based automatic generation of treatment recommendation has been attracting much attention. However, medical datasets are usually small, which may lead to over-fitting and inferior performances of deep learning models. In this paper, we propose multi-objective data enhancement method to indirectly scale up the medical data to avoid over-fitting and generate high quantity treatment recommendations. Specifically, we define a main and several auxiliary tasks on the same dataset and train a specific model for each of these tasks to learn different aspects of knowledge in limited data scale. Meanwhile, a Soft Parameter Sharing method is exploited to share learned knowledge among models. By sharing the knowledge learned by auxiliary tasks to the main task, the proposed method can take different semantic distributions into account during the training process of the main task. We collected an ultrasound dataset of thyroid nodules that contains Findings, Impressions and Treatment Recommendations labeled by professional doctors. We conducted various experiments on the dataset to validate the proposed method and justified its better performance than existing methods.
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spelling pubmed-95834672022-10-21 Multi-objective data enhancement for deep learning-based ultrasound analysis Piao, Chengkai Lv, Mengyue Wang, Shujie Zhou, Rongyan Wang, Yuchen Wei, Jinmao Liu, Jian BMC Bioinformatics Research Recently, Deep Learning based automatic generation of treatment recommendation has been attracting much attention. However, medical datasets are usually small, which may lead to over-fitting and inferior performances of deep learning models. In this paper, we propose multi-objective data enhancement method to indirectly scale up the medical data to avoid over-fitting and generate high quantity treatment recommendations. Specifically, we define a main and several auxiliary tasks on the same dataset and train a specific model for each of these tasks to learn different aspects of knowledge in limited data scale. Meanwhile, a Soft Parameter Sharing method is exploited to share learned knowledge among models. By sharing the knowledge learned by auxiliary tasks to the main task, the proposed method can take different semantic distributions into account during the training process of the main task. We collected an ultrasound dataset of thyroid nodules that contains Findings, Impressions and Treatment Recommendations labeled by professional doctors. We conducted various experiments on the dataset to validate the proposed method and justified its better performance than existing methods. BioMed Central 2022-10-20 /pmc/articles/PMC9583467/ /pubmed/36266626 http://dx.doi.org/10.1186/s12859-022-04985-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Piao, Chengkai
Lv, Mengyue
Wang, Shujie
Zhou, Rongyan
Wang, Yuchen
Wei, Jinmao
Liu, Jian
Multi-objective data enhancement for deep learning-based ultrasound analysis
title Multi-objective data enhancement for deep learning-based ultrasound analysis
title_full Multi-objective data enhancement for deep learning-based ultrasound analysis
title_fullStr Multi-objective data enhancement for deep learning-based ultrasound analysis
title_full_unstemmed Multi-objective data enhancement for deep learning-based ultrasound analysis
title_short Multi-objective data enhancement for deep learning-based ultrasound analysis
title_sort multi-objective data enhancement for deep learning-based ultrasound analysis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583467/
https://www.ncbi.nlm.nih.gov/pubmed/36266626
http://dx.doi.org/10.1186/s12859-022-04985-4
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