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Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study

BACKGROUND: Although anxiety disorders are one of the most prevalent mental disorders, their underlying biological mechanisms have not yet been fully elucidated. In recent years, genetically determined metabolites (GDMs) have been used to reveal the biological mechanisms of mental disorders. However...

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Autores principales: Xiao, Gui, He, Qingnan, Liu, Li, Zhang, Tingting, Zhou, Mengjia, Li, Xingxing, Chen, Yijun, Chen, Yanyi, Qin, Chunxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583573/
https://www.ncbi.nlm.nih.gov/pubmed/36266699
http://dx.doi.org/10.1186/s12967-022-03691-2
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author Xiao, Gui
He, Qingnan
Liu, Li
Zhang, Tingting
Zhou, Mengjia
Li, Xingxing
Chen, Yijun
Chen, Yanyi
Qin, Chunxiang
author_facet Xiao, Gui
He, Qingnan
Liu, Li
Zhang, Tingting
Zhou, Mengjia
Li, Xingxing
Chen, Yijun
Chen, Yanyi
Qin, Chunxiang
author_sort Xiao, Gui
collection PubMed
description BACKGROUND: Although anxiety disorders are one of the most prevalent mental disorders, their underlying biological mechanisms have not yet been fully elucidated. In recent years, genetically determined metabolites (GDMs) have been used to reveal the biological mechanisms of mental disorders. However, this strategy has not been applied to anxiety disorders. Herein, we explored the causality of GDMs on anxiety disorders through Mendelian randomization study, with the overarching goal of unraveling the biological mechanisms. METHODS: A two-sample Mendelian randomization (MR) analysis was implemented to assess the causality of GDMs on anxiety disorders. A genome-wide association study (GWAS) of 486 metabolites was used as the exposure, whereas four different GWAS datasets of anxiety disorders were the outcomes. Notably, all datasets were acquired from publicly available databases. A genetic instrumental variable (IV) was used to explore the causality between the metabolite and anxiety disorders for each metabolite. The MR Steiger filtering method was implemented to examine the causality between metabolites and anxiety disorders. The standard inverse variance weighted (IVW) method was first used for the causality analysis, followed by three additional MR methods (the MR-Egger, weighted median, and MR-PRESSO (pleiotropy residual sum and outlier) methods) for sensitivity analyses in MR analysis. MR-Egger intercept, and Cochran’s Q statistical analysis were used to evaluate possible heterogeneity and pleiotropy. Bonferroni correction was used to determine the causative association features (P < 1.03 × 10(–4)). Furthermore, metabolic pathways analysis was performed using the web-based MetaboAnalyst 5.0 software. All statistical analysis were performed in R software. The STROBE-MR checklist for the reporting of MR studies was used in this study. RESULTS: In MR analysis, 85 significant causative relationship GDMs were identified. Among them, 11 metabolites were overlapped in the four different datasets of anxiety disorders. Bonferroni correction showing1-linoleoylglycerophosphoethanolamine (OR(fixed-effect IVW) = 1.04; 95% CI 1.021–1.06; P(fixed-effect IVW) = 4.3 × 10(–5)) was the most reliable causal metabolite. Our results were robust even without a single SNP because of a “leave-one-out” analysis. The MR-Egger intercept test indicated that genetic pleiotropy had no effect on the results (intercept = − 0.0013, SE = 0.0006, P = 0.06). No heterogeneity was detected by Cochran’s Q test (MR-Egger. Q = 7.68, P = 0.742; IVW. Q = 12.12, P = 0.436). A directionality test conducted by MR Steiger confirmed our estimation of potential causal direction (P < 0.001). In addition, two significant pathways, the “primary bile acid biosynthesis” pathway (P = 0.008) and the “valine, leucine, and isoleucine biosynthesis” pathway (P = 0.03), were identified through metabolic pathway analysis. CONCLUSION: This study provides new insights into the causal effects of GDMs on anxiety disorders by integrating genomics and metabolomics. The metabolites that drive anxiety disorders may be suited to serve as biomarkers and also will help to unravel the biological mechanisms of anxiety disorders. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03691-2.
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spelling pubmed-95835732022-10-21 Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study Xiao, Gui He, Qingnan Liu, Li Zhang, Tingting Zhou, Mengjia Li, Xingxing Chen, Yijun Chen, Yanyi Qin, Chunxiang J Transl Med Research BACKGROUND: Although anxiety disorders are one of the most prevalent mental disorders, their underlying biological mechanisms have not yet been fully elucidated. In recent years, genetically determined metabolites (GDMs) have been used to reveal the biological mechanisms of mental disorders. However, this strategy has not been applied to anxiety disorders. Herein, we explored the causality of GDMs on anxiety disorders through Mendelian randomization study, with the overarching goal of unraveling the biological mechanisms. METHODS: A two-sample Mendelian randomization (MR) analysis was implemented to assess the causality of GDMs on anxiety disorders. A genome-wide association study (GWAS) of 486 metabolites was used as the exposure, whereas four different GWAS datasets of anxiety disorders were the outcomes. Notably, all datasets were acquired from publicly available databases. A genetic instrumental variable (IV) was used to explore the causality between the metabolite and anxiety disorders for each metabolite. The MR Steiger filtering method was implemented to examine the causality between metabolites and anxiety disorders. The standard inverse variance weighted (IVW) method was first used for the causality analysis, followed by three additional MR methods (the MR-Egger, weighted median, and MR-PRESSO (pleiotropy residual sum and outlier) methods) for sensitivity analyses in MR analysis. MR-Egger intercept, and Cochran’s Q statistical analysis were used to evaluate possible heterogeneity and pleiotropy. Bonferroni correction was used to determine the causative association features (P < 1.03 × 10(–4)). Furthermore, metabolic pathways analysis was performed using the web-based MetaboAnalyst 5.0 software. All statistical analysis were performed in R software. The STROBE-MR checklist for the reporting of MR studies was used in this study. RESULTS: In MR analysis, 85 significant causative relationship GDMs were identified. Among them, 11 metabolites were overlapped in the four different datasets of anxiety disorders. Bonferroni correction showing1-linoleoylglycerophosphoethanolamine (OR(fixed-effect IVW) = 1.04; 95% CI 1.021–1.06; P(fixed-effect IVW) = 4.3 × 10(–5)) was the most reliable causal metabolite. Our results were robust even without a single SNP because of a “leave-one-out” analysis. The MR-Egger intercept test indicated that genetic pleiotropy had no effect on the results (intercept = − 0.0013, SE = 0.0006, P = 0.06). No heterogeneity was detected by Cochran’s Q test (MR-Egger. Q = 7.68, P = 0.742; IVW. Q = 12.12, P = 0.436). A directionality test conducted by MR Steiger confirmed our estimation of potential causal direction (P < 0.001). In addition, two significant pathways, the “primary bile acid biosynthesis” pathway (P = 0.008) and the “valine, leucine, and isoleucine biosynthesis” pathway (P = 0.03), were identified through metabolic pathway analysis. CONCLUSION: This study provides new insights into the causal effects of GDMs on anxiety disorders by integrating genomics and metabolomics. The metabolites that drive anxiety disorders may be suited to serve as biomarkers and also will help to unravel the biological mechanisms of anxiety disorders. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-022-03691-2. BioMed Central 2022-10-20 /pmc/articles/PMC9583573/ /pubmed/36266699 http://dx.doi.org/10.1186/s12967-022-03691-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Xiao, Gui
He, Qingnan
Liu, Li
Zhang, Tingting
Zhou, Mengjia
Li, Xingxing
Chen, Yijun
Chen, Yanyi
Qin, Chunxiang
Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title_full Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title_fullStr Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title_full_unstemmed Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title_short Causality of genetically determined metabolites on anxiety disorders: a two-sample Mendelian randomization study
title_sort causality of genetically determined metabolites on anxiety disorders: a two-sample mendelian randomization study
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9583573/
https://www.ncbi.nlm.nih.gov/pubmed/36266699
http://dx.doi.org/10.1186/s12967-022-03691-2
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