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Contribution of CRISPRable DNA to human complex traits
CRISPR-Cas is a powerful genome editing tool for various species and human cell lines, widely used in many research areas including studying the mechanisms, targets, and gene therapies of human diseases. Recent developments have even allowed high-throughput genetic screening using the CRISPR system....
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585070/ https://www.ncbi.nlm.nih.gov/pubmed/36266475 http://dx.doi.org/10.1038/s42003-022-03969-7 |
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author | Zhai, Ranran Zheng, Chenqing Yang, Zhijian Li, Ting Chen, Jiantao Shen, Xia |
author_facet | Zhai, Ranran Zheng, Chenqing Yang, Zhijian Li, Ting Chen, Jiantao Shen, Xia |
author_sort | Zhai, Ranran |
collection | PubMed |
description | CRISPR-Cas is a powerful genome editing tool for various species and human cell lines, widely used in many research areas including studying the mechanisms, targets, and gene therapies of human diseases. Recent developments have even allowed high-throughput genetic screening using the CRISPR system. However, due to the practical and ethical limitations in human gene editing research, little is known about whether CRISPR-editable DNA segments could influence human complex traits or diseases. Here, we investigated the human genomic regions condensed with different CRISPR Cas enzymes’ protospacer-adjacent motifs (PAMs). We found that Cas enzymes with GC-rich PAMs could interfere more with the genomic regions that harbor enriched heritability for human complex traits and diseases. The results linked GC content across the genome to the functional genomic elements in the heritability enrichment of human complex traits. We provide a genetic overview of the effects of high-throughput genome editing on human complex traits. |
format | Online Article Text |
id | pubmed-9585070 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95850702022-10-22 Contribution of CRISPRable DNA to human complex traits Zhai, Ranran Zheng, Chenqing Yang, Zhijian Li, Ting Chen, Jiantao Shen, Xia Commun Biol Article CRISPR-Cas is a powerful genome editing tool for various species and human cell lines, widely used in many research areas including studying the mechanisms, targets, and gene therapies of human diseases. Recent developments have even allowed high-throughput genetic screening using the CRISPR system. However, due to the practical and ethical limitations in human gene editing research, little is known about whether CRISPR-editable DNA segments could influence human complex traits or diseases. Here, we investigated the human genomic regions condensed with different CRISPR Cas enzymes’ protospacer-adjacent motifs (PAMs). We found that Cas enzymes with GC-rich PAMs could interfere more with the genomic regions that harbor enriched heritability for human complex traits and diseases. The results linked GC content across the genome to the functional genomic elements in the heritability enrichment of human complex traits. We provide a genetic overview of the effects of high-throughput genome editing on human complex traits. Nature Publishing Group UK 2022-10-20 /pmc/articles/PMC9585070/ /pubmed/36266475 http://dx.doi.org/10.1038/s42003-022-03969-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhai, Ranran Zheng, Chenqing Yang, Zhijian Li, Ting Chen, Jiantao Shen, Xia Contribution of CRISPRable DNA to human complex traits |
title | Contribution of CRISPRable DNA to human complex traits |
title_full | Contribution of CRISPRable DNA to human complex traits |
title_fullStr | Contribution of CRISPRable DNA to human complex traits |
title_full_unstemmed | Contribution of CRISPRable DNA to human complex traits |
title_short | Contribution of CRISPRable DNA to human complex traits |
title_sort | contribution of crisprable dna to human complex traits |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585070/ https://www.ncbi.nlm.nih.gov/pubmed/36266475 http://dx.doi.org/10.1038/s42003-022-03969-7 |
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