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The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma

Introduction: Intrahepatic cholangiocarcinoma (iCCA) is a heterogeneous entity with diverse etiologies, morphologies, and clinical outcomes, but our knowledge of its epidemiology and carcinogenesis is very limited. Materials and methods: The expression patterns of circRNAs were explored in iCCA tiss...

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Autores principales: Liang, Zi, Liu, Liyan, Guo, Xinyi, Wu, Xia, Yu, Yun-Li, Yu, Ziyang, Hu, Xiaolong, Zhang, Xing, Wang, Ji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585165/
https://www.ncbi.nlm.nih.gov/pubmed/36274844
http://dx.doi.org/10.3389/fcell.2022.942853
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author Liang, Zi
Liu, Liyan
Guo, Xinyi
Wu, Xia
Yu, Yun-Li
Yu, Ziyang
Hu, Xiaolong
Zhang, Xing
Wang, Ji
author_facet Liang, Zi
Liu, Liyan
Guo, Xinyi
Wu, Xia
Yu, Yun-Li
Yu, Ziyang
Hu, Xiaolong
Zhang, Xing
Wang, Ji
author_sort Liang, Zi
collection PubMed
description Introduction: Intrahepatic cholangiocarcinoma (iCCA) is a heterogeneous entity with diverse etiologies, morphologies, and clinical outcomes, but our knowledge of its epidemiology and carcinogenesis is very limited. Materials and methods: The expression patterns of circRNAs were explored in iCCA tissues and corresponding adjacent normal ones, denoted by (iCCA) and (iCCAP), respectively, using high-throughput sequencing. Results: A total of 117 differential expressed (DE) circRNAs were identified. Based on the parental transcripts of circRNAs, these DE circRNAs were related to several important GO terms and were enriched in important pathways. Two circRNA-mediated ceRNA networks were constructed and many important metabolic pathways related to mRNAs were regulated by DE circRNAs via miRNAs. Conclusion: Our study revealed the DE circRNAs in the iCCA tissues compared with iCCAP ones, suggesting that circRNAs may play crucial roles in the pathogenesis of iCCA.
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spelling pubmed-95851652022-10-22 The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma Liang, Zi Liu, Liyan Guo, Xinyi Wu, Xia Yu, Yun-Li Yu, Ziyang Hu, Xiaolong Zhang, Xing Wang, Ji Front Cell Dev Biol Cell and Developmental Biology Introduction: Intrahepatic cholangiocarcinoma (iCCA) is a heterogeneous entity with diverse etiologies, morphologies, and clinical outcomes, but our knowledge of its epidemiology and carcinogenesis is very limited. Materials and methods: The expression patterns of circRNAs were explored in iCCA tissues and corresponding adjacent normal ones, denoted by (iCCA) and (iCCAP), respectively, using high-throughput sequencing. Results: A total of 117 differential expressed (DE) circRNAs were identified. Based on the parental transcripts of circRNAs, these DE circRNAs were related to several important GO terms and were enriched in important pathways. Two circRNA-mediated ceRNA networks were constructed and many important metabolic pathways related to mRNAs were regulated by DE circRNAs via miRNAs. Conclusion: Our study revealed the DE circRNAs in the iCCA tissues compared with iCCAP ones, suggesting that circRNAs may play crucial roles in the pathogenesis of iCCA. Frontiers Media S.A. 2022-10-07 /pmc/articles/PMC9585165/ /pubmed/36274844 http://dx.doi.org/10.3389/fcell.2022.942853 Text en Copyright © 2022 Liang, Liu, Guo, Wu, Yu, Yu, Hu, Zhang and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Liang, Zi
Liu, Liyan
Guo, Xinyi
Wu, Xia
Yu, Yun-Li
Yu, Ziyang
Hu, Xiaolong
Zhang, Xing
Wang, Ji
The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title_full The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title_fullStr The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title_full_unstemmed The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title_short The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
title_sort expression profiles of circular rnas and competing endogenous rna networks in intrahepatic cholangiocarcinoma
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585165/
https://www.ncbi.nlm.nih.gov/pubmed/36274844
http://dx.doi.org/10.3389/fcell.2022.942853
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