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Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water
BACKGROUND: A visual, rapid, simple method was developed based on a loop-mediated isothermal amplification (LAMP) assay to detect Vibrio vulnificus in aquatic products and aquaculture waters. RESULTS: Genomic DNA was extracted from Vibrio vulnificus using the boiling method, and optimized primers we...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585733/ https://www.ncbi.nlm.nih.gov/pubmed/36271365 http://dx.doi.org/10.1186/s12866-022-02656-1 |
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author | Tian, Zhuo Yang, Lili Qi, Xin Zheng, Qiuyue Shang, Dejing Cao, Jijuan |
author_facet | Tian, Zhuo Yang, Lili Qi, Xin Zheng, Qiuyue Shang, Dejing Cao, Jijuan |
author_sort | Tian, Zhuo |
collection | PubMed |
description | BACKGROUND: A visual, rapid, simple method was developed based on a loop-mediated isothermal amplification (LAMP) assay to detect Vibrio vulnificus in aquatic products and aquaculture waters. RESULTS: Genomic DNA was extracted from Vibrio vulnificus using the boiling method, and optimized primers were used to detect the gyrB gene using a visual LAMP method. The sensitivity of the assay was 10 fg/μL, and the obtained results were stable and reliable. Out of 655 aquatic product samples and 558 aquaculture water samples, the positive rates of Vibrio vulnificus detection were 9.01% and 8.60%, respectively, which are markedly higher than those of the traditional culture identification methods. CONCLUSION: The relatively simple technical requirements, low equipment cost, and rapid detection make the visual LAMP method for the detection of Vibrio vulnificus a convenient choice for field detection in the aquaculture industry. |
format | Online Article Text |
id | pubmed-9585733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-95857332022-10-22 Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water Tian, Zhuo Yang, Lili Qi, Xin Zheng, Qiuyue Shang, Dejing Cao, Jijuan BMC Microbiol Research BACKGROUND: A visual, rapid, simple method was developed based on a loop-mediated isothermal amplification (LAMP) assay to detect Vibrio vulnificus in aquatic products and aquaculture waters. RESULTS: Genomic DNA was extracted from Vibrio vulnificus using the boiling method, and optimized primers were used to detect the gyrB gene using a visual LAMP method. The sensitivity of the assay was 10 fg/μL, and the obtained results were stable and reliable. Out of 655 aquatic product samples and 558 aquaculture water samples, the positive rates of Vibrio vulnificus detection were 9.01% and 8.60%, respectively, which are markedly higher than those of the traditional culture identification methods. CONCLUSION: The relatively simple technical requirements, low equipment cost, and rapid detection make the visual LAMP method for the detection of Vibrio vulnificus a convenient choice for field detection in the aquaculture industry. BioMed Central 2022-10-21 /pmc/articles/PMC9585733/ /pubmed/36271365 http://dx.doi.org/10.1186/s12866-022-02656-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Tian, Zhuo Yang, Lili Qi, Xin Zheng, Qiuyue Shang, Dejing Cao, Jijuan Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title | Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title_full | Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title_fullStr | Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title_full_unstemmed | Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title_short | Visual LAMP method for the detection of Vibrio vulnificus in aquatic products and environmental water |
title_sort | visual lamp method for the detection of vibrio vulnificus in aquatic products and environmental water |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9585733/ https://www.ncbi.nlm.nih.gov/pubmed/36271365 http://dx.doi.org/10.1186/s12866-022-02656-1 |
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