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Origin recognition complex harbors an intrinsic nucleosome remodeling activity

Eukaryotic DNA replication is initiated at multiple chromosomal sites known as origins of replication that are specifically recognized by the origin recognition complex (ORC) containing multiple ATPase sites. In budding yeast, ORC binds to specific DNA sequences known as autonomously replicating seq...

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Autores principales: Li, Sai, Wasserman, Michael R., Yurieva, Olga, Bai, Lu, O’Donnell, Michael E., Liu, Shixin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586268/
https://www.ncbi.nlm.nih.gov/pubmed/36215487
http://dx.doi.org/10.1073/pnas.2211568119
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author Li, Sai
Wasserman, Michael R.
Yurieva, Olga
Bai, Lu
O’Donnell, Michael E.
Liu, Shixin
author_facet Li, Sai
Wasserman, Michael R.
Yurieva, Olga
Bai, Lu
O’Donnell, Michael E.
Liu, Shixin
author_sort Li, Sai
collection PubMed
description Eukaryotic DNA replication is initiated at multiple chromosomal sites known as origins of replication that are specifically recognized by the origin recognition complex (ORC) containing multiple ATPase sites. In budding yeast, ORC binds to specific DNA sequences known as autonomously replicating sequences (ARSs) that are mostly nucleosome depleted. However, nucleosomes may still inhibit the licensing of some origins by occluding ORC binding and subsequent MCM helicase loading. Using purified proteins and single-molecule visualization, we find here that the ORC can eject histones from a nucleosome in an ATP-dependent manner. The ORC selectively evicts H2A-H2B dimers but leaves the (H3-H4)(2) tetramer on DNA. It also discriminates canonical H2A from the H2A.Z variant, evicting the former while retaining the latter. Finally, the bromo-adjacent homology (BAH) domain of the Orc1 subunit is essential for ORC-mediated histone eviction. These findings suggest that the ORC is a bona fide nucleosome remodeler that functions to create a local chromatin environment optimal for origin activity.
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spelling pubmed-95862682022-10-22 Origin recognition complex harbors an intrinsic nucleosome remodeling activity Li, Sai Wasserman, Michael R. Yurieva, Olga Bai, Lu O’Donnell, Michael E. Liu, Shixin Proc Natl Acad Sci U S A Biological Sciences Eukaryotic DNA replication is initiated at multiple chromosomal sites known as origins of replication that are specifically recognized by the origin recognition complex (ORC) containing multiple ATPase sites. In budding yeast, ORC binds to specific DNA sequences known as autonomously replicating sequences (ARSs) that are mostly nucleosome depleted. However, nucleosomes may still inhibit the licensing of some origins by occluding ORC binding and subsequent MCM helicase loading. Using purified proteins and single-molecule visualization, we find here that the ORC can eject histones from a nucleosome in an ATP-dependent manner. The ORC selectively evicts H2A-H2B dimers but leaves the (H3-H4)(2) tetramer on DNA. It also discriminates canonical H2A from the H2A.Z variant, evicting the former while retaining the latter. Finally, the bromo-adjacent homology (BAH) domain of the Orc1 subunit is essential for ORC-mediated histone eviction. These findings suggest that the ORC is a bona fide nucleosome remodeler that functions to create a local chromatin environment optimal for origin activity. National Academy of Sciences 2022-10-10 2022-10-18 /pmc/articles/PMC9586268/ /pubmed/36215487 http://dx.doi.org/10.1073/pnas.2211568119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Biological Sciences
Li, Sai
Wasserman, Michael R.
Yurieva, Olga
Bai, Lu
O’Donnell, Michael E.
Liu, Shixin
Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title_full Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title_fullStr Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title_full_unstemmed Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title_short Origin recognition complex harbors an intrinsic nucleosome remodeling activity
title_sort origin recognition complex harbors an intrinsic nucleosome remodeling activity
topic Biological Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586268/
https://www.ncbi.nlm.nih.gov/pubmed/36215487
http://dx.doi.org/10.1073/pnas.2211568119
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