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Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses
The genus Mentha encompasses mint species cultivated for their essential oils, which are formulated into a vast array of consumer products. However, the systematics of the genus Mentha is very complicated and still uncertain. This is largely because of the presence of frequent interspecific hybridiz...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586595/ https://www.ncbi.nlm.nih.gov/pubmed/36278127 http://dx.doi.org/10.1080/23802359.2022.2130713 |
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author | Zubair Filimban, Faten Yarádua, Samaila Samaila Bello, Abubakar Choudhry, Hani |
author_facet | Zubair Filimban, Faten Yarádua, Samaila Samaila Bello, Abubakar Choudhry, Hani |
author_sort | Zubair Filimban, Faten |
collection | PubMed |
description | The genus Mentha encompasses mint species cultivated for their essential oils, which are formulated into a vast array of consumer products. However, the systematics of the genus Mentha is very complicated and still uncertain. This is largely because of the presence of frequent interspecific hybridization, variation in chromosome number, cytomixis, polymorphism in morphology and essential oil composition under different environmental conditions, colonial mutant propagation, as well as the occurrence of polyploidy, aneuploidy, and nothomorphs. Here, we present the plastome assemblies for a wilt-resistant Saudi Arabian accession of Mentha longifolia (L.) Huds and an alien hybrid Mentha × verticillata L. which are 152,078 bp and 152,026 bp in length, respectively, and exhibited large single-copy (LSC) and small single-copy (SSC) regions separated by a pair of inverted repeat regions. The chloroplast genome of M. longifolia has 133 annotated genes, including 88 protein-coding genes and 37 tRNAs while M. × verticillata has 133 annotated genes, including 87 protein-coding genes and 38 tRNAs. Both cp genomes have eight rRNA genes. Phylogenetic analysis using a total chloroplast genome DNA sequence of 17 species revealed that M. longifolia sequenced in this study did not form a sister relationship with M. longifolia from another study. This opens a window for further investigations. |
format | Online Article Text |
id | pubmed-9586595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-95865952022-10-22 Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses Zubair Filimban, Faten Yarádua, Samaila Samaila Bello, Abubakar Choudhry, Hani Mitochondrial DNA B Resour Plastome Announcement The genus Mentha encompasses mint species cultivated for their essential oils, which are formulated into a vast array of consumer products. However, the systematics of the genus Mentha is very complicated and still uncertain. This is largely because of the presence of frequent interspecific hybridization, variation in chromosome number, cytomixis, polymorphism in morphology and essential oil composition under different environmental conditions, colonial mutant propagation, as well as the occurrence of polyploidy, aneuploidy, and nothomorphs. Here, we present the plastome assemblies for a wilt-resistant Saudi Arabian accession of Mentha longifolia (L.) Huds and an alien hybrid Mentha × verticillata L. which are 152,078 bp and 152,026 bp in length, respectively, and exhibited large single-copy (LSC) and small single-copy (SSC) regions separated by a pair of inverted repeat regions. The chloroplast genome of M. longifolia has 133 annotated genes, including 88 protein-coding genes and 37 tRNAs while M. × verticillata has 133 annotated genes, including 87 protein-coding genes and 38 tRNAs. Both cp genomes have eight rRNA genes. Phylogenetic analysis using a total chloroplast genome DNA sequence of 17 species revealed that M. longifolia sequenced in this study did not form a sister relationship with M. longifolia from another study. This opens a window for further investigations. Taylor & Francis 2022-10-16 /pmc/articles/PMC9586595/ /pubmed/36278127 http://dx.doi.org/10.1080/23802359.2022.2130713 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Zubair Filimban, Faten Yarádua, Samaila Samaila Bello, Abubakar Choudhry, Hani Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title | Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title_full | Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title_fullStr | Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title_full_unstemmed | Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title_short | Complete chloroplast genomes of two mint species (Lamiaceae) from Al-Madinah, Saudi Arabia: phylogenetic and genomic comparative analyses |
title_sort | complete chloroplast genomes of two mint species (lamiaceae) from al-madinah, saudi arabia: phylogenetic and genomic comparative analyses |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586595/ https://www.ncbi.nlm.nih.gov/pubmed/36278127 http://dx.doi.org/10.1080/23802359.2022.2130713 |
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