Chloroplast genome characterization of Rubus arcticus L.

Rubus arcticus Linnaeus (1753) is a medicinal and edible plant in the Rosaceae with wide distribution in northeast China. The total length of the genome was 156,668 bp with a GC content of 37.1%, including a large single-copy (LSC, 85,958 bp) region, a small single-copy region (SSC, 18,756 bp), and...

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Detalles Bibliográficos
Autores principales: Jiang, Zhehui, Wang, Tianhao, Gao, Yuan, Shu, Dingxi, Li, Xiangquan, Ren, Weichao, Ma, Wei, Bao, Yihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586667/
https://www.ncbi.nlm.nih.gov/pubmed/36278129
http://dx.doi.org/10.1080/23802359.2022.2130715
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author Jiang, Zhehui
Wang, Tianhao
Gao, Yuan
Shu, Dingxi
Li, Xiangquan
Ren, Weichao
Ma, Wei
Bao, Yihong
author_facet Jiang, Zhehui
Wang, Tianhao
Gao, Yuan
Shu, Dingxi
Li, Xiangquan
Ren, Weichao
Ma, Wei
Bao, Yihong
author_sort Jiang, Zhehui
collection PubMed
description Rubus arcticus Linnaeus (1753) is a medicinal and edible plant in the Rosaceae with wide distribution in northeast China. The total length of the genome was 156,668 bp with a GC content of 37.1%, including a large single-copy (LSC, 85,958 bp) region, a small single-copy region (SSC, 18,756 bp), and inverted repeat (IR, 51,954 bp) regions. A total of 129 genes were identified. The numbers of protein genes tRNAs and rRNAs were 85, 36, and 8, respectively. Phylogenetic analysis indicated that R. arcticus belongs to the Rubus genus. Published R. arcticus chloroplast genomes have yielded insights into the closely related species identification, phylogenetic position and Rubus evolution.
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spelling pubmed-95866672022-10-22 Chloroplast genome characterization of Rubus arcticus L. Jiang, Zhehui Wang, Tianhao Gao, Yuan Shu, Dingxi Li, Xiangquan Ren, Weichao Ma, Wei Bao, Yihong Mitochondrial DNA B Resour Plastome Announcement Rubus arcticus Linnaeus (1753) is a medicinal and edible plant in the Rosaceae with wide distribution in northeast China. The total length of the genome was 156,668 bp with a GC content of 37.1%, including a large single-copy (LSC, 85,958 bp) region, a small single-copy region (SSC, 18,756 bp), and inverted repeat (IR, 51,954 bp) regions. A total of 129 genes were identified. The numbers of protein genes tRNAs and rRNAs were 85, 36, and 8, respectively. Phylogenetic analysis indicated that R. arcticus belongs to the Rubus genus. Published R. arcticus chloroplast genomes have yielded insights into the closely related species identification, phylogenetic position and Rubus evolution. Taylor & Francis 2022-10-18 /pmc/articles/PMC9586667/ /pubmed/36278129 http://dx.doi.org/10.1080/23802359.2022.2130715 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Jiang, Zhehui
Wang, Tianhao
Gao, Yuan
Shu, Dingxi
Li, Xiangquan
Ren, Weichao
Ma, Wei
Bao, Yihong
Chloroplast genome characterization of Rubus arcticus L.
title Chloroplast genome characterization of Rubus arcticus L.
title_full Chloroplast genome characterization of Rubus arcticus L.
title_fullStr Chloroplast genome characterization of Rubus arcticus L.
title_full_unstemmed Chloroplast genome characterization of Rubus arcticus L.
title_short Chloroplast genome characterization of Rubus arcticus L.
title_sort chloroplast genome characterization of rubus arcticus l.
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586667/
https://www.ncbi.nlm.nih.gov/pubmed/36278129
http://dx.doi.org/10.1080/23802359.2022.2130715
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