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Photoacoustic image synthesis with generative adversarial networks
Photoacoustic tomography (PAT) has the potential to recover morphological and functional tissue properties with high spatial resolution. However, previous attempts to solve the optical inverse problem with supervised machine learning were hampered by the absence of labeled reference data. While this...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9587371/ https://www.ncbi.nlm.nih.gov/pubmed/36281320 http://dx.doi.org/10.1016/j.pacs.2022.100402 |
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author | Schellenberg, Melanie Gröhl, Janek Dreher, Kris K. Nölke, Jan-Hinrich Holzwarth, Niklas Tizabi, Minu D. Seitel, Alexander Maier-Hein, Lena |
author_facet | Schellenberg, Melanie Gröhl, Janek Dreher, Kris K. Nölke, Jan-Hinrich Holzwarth, Niklas Tizabi, Minu D. Seitel, Alexander Maier-Hein, Lena |
author_sort | Schellenberg, Melanie |
collection | PubMed |
description | Photoacoustic tomography (PAT) has the potential to recover morphological and functional tissue properties with high spatial resolution. However, previous attempts to solve the optical inverse problem with supervised machine learning were hampered by the absence of labeled reference data. While this bottleneck has been tackled by simulating training data, the domain gap between real and simulated images remains an unsolved challenge. We propose a novel approach to PAT image synthesis that involves subdividing the challenge of generating plausible simulations into two disjoint problems: (1) Probabilistic generation of realistic tissue morphology, and (2) pixel-wise assignment of corresponding optical and acoustic properties. The former is achieved with Generative Adversarial Networks (GANs) trained on semantically annotated medical imaging data. According to a validation study on a downstream task our approach yields more realistic synthetic images than the traditional model-based approach and could therefore become a fundamental step for deep learning-based quantitative PAT (qPAT). |
format | Online Article Text |
id | pubmed-9587371 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-95873712022-10-23 Photoacoustic image synthesis with generative adversarial networks Schellenberg, Melanie Gröhl, Janek Dreher, Kris K. Nölke, Jan-Hinrich Holzwarth, Niklas Tizabi, Minu D. Seitel, Alexander Maier-Hein, Lena Photoacoustics Research Article Photoacoustic tomography (PAT) has the potential to recover morphological and functional tissue properties with high spatial resolution. However, previous attempts to solve the optical inverse problem with supervised machine learning were hampered by the absence of labeled reference data. While this bottleneck has been tackled by simulating training data, the domain gap between real and simulated images remains an unsolved challenge. We propose a novel approach to PAT image synthesis that involves subdividing the challenge of generating plausible simulations into two disjoint problems: (1) Probabilistic generation of realistic tissue morphology, and (2) pixel-wise assignment of corresponding optical and acoustic properties. The former is achieved with Generative Adversarial Networks (GANs) trained on semantically annotated medical imaging data. According to a validation study on a downstream task our approach yields more realistic synthetic images than the traditional model-based approach and could therefore become a fundamental step for deep learning-based quantitative PAT (qPAT). Elsevier 2022-09-13 /pmc/articles/PMC9587371/ /pubmed/36281320 http://dx.doi.org/10.1016/j.pacs.2022.100402 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Schellenberg, Melanie Gröhl, Janek Dreher, Kris K. Nölke, Jan-Hinrich Holzwarth, Niklas Tizabi, Minu D. Seitel, Alexander Maier-Hein, Lena Photoacoustic image synthesis with generative adversarial networks |
title | Photoacoustic image synthesis with generative adversarial networks |
title_full | Photoacoustic image synthesis with generative adversarial networks |
title_fullStr | Photoacoustic image synthesis with generative adversarial networks |
title_full_unstemmed | Photoacoustic image synthesis with generative adversarial networks |
title_short | Photoacoustic image synthesis with generative adversarial networks |
title_sort | photoacoustic image synthesis with generative adversarial networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9587371/ https://www.ncbi.nlm.nih.gov/pubmed/36281320 http://dx.doi.org/10.1016/j.pacs.2022.100402 |
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