Cargando…
Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Str...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588064/ https://www.ncbi.nlm.nih.gov/pubmed/36273096 http://dx.doi.org/10.1038/s41598-022-22784-y |
_version_ | 1784814045474324480 |
---|---|
author | Ongenae, Véronique Azeredo, Joana Kropinski, Andrew M. Rozen, Daniel Briegel, Ariane Claessen, Dennis |
author_facet | Ongenae, Véronique Azeredo, Joana Kropinski, Andrew M. Rozen, Daniel Briegel, Ariane Claessen, Dennis |
author_sort | Ongenae, Véronique |
collection | PubMed |
description | Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. |
format | Online Article Text |
id | pubmed-9588064 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95880642022-10-24 Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus Ongenae, Véronique Azeredo, Joana Kropinski, Andrew M. Rozen, Daniel Briegel, Ariane Claessen, Dennis Sci Rep Article Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. Nature Publishing Group UK 2022-10-22 /pmc/articles/PMC9588064/ /pubmed/36273096 http://dx.doi.org/10.1038/s41598-022-22784-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ongenae, Véronique Azeredo, Joana Kropinski, Andrew M. Rozen, Daniel Briegel, Ariane Claessen, Dennis Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title_full | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title_fullStr | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title_full_unstemmed | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title_short | Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus |
title_sort | genome sequence and characterization of streptomyces phage pablito, representing a new species within the genus janusvirus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588064/ https://www.ncbi.nlm.nih.gov/pubmed/36273096 http://dx.doi.org/10.1038/s41598-022-22784-y |
work_keys_str_mv | AT ongenaeveronique genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus AT azeredojoana genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus AT kropinskiandrewm genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus AT rozendaniel genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus AT briegelariane genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus AT claessendennis genomesequenceandcharacterizationofstreptomycesphagepablitorepresentinganewspecieswithinthegenusjanusvirus |