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Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus

Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Str...

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Autores principales: Ongenae, Véronique, Azeredo, Joana, Kropinski, Andrew M., Rozen, Daniel, Briegel, Ariane, Claessen, Dennis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588064/
https://www.ncbi.nlm.nih.gov/pubmed/36273096
http://dx.doi.org/10.1038/s41598-022-22784-y
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author Ongenae, Véronique
Azeredo, Joana
Kropinski, Andrew M.
Rozen, Daniel
Briegel, Ariane
Claessen, Dennis
author_facet Ongenae, Véronique
Azeredo, Joana
Kropinski, Andrew M.
Rozen, Daniel
Briegel, Ariane
Claessen, Dennis
author_sort Ongenae, Véronique
collection PubMed
description Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae.
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spelling pubmed-95880642022-10-24 Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus Ongenae, Véronique Azeredo, Joana Kropinski, Andrew M. Rozen, Daniel Briegel, Ariane Claessen, Dennis Sci Rep Article Streptomycetes are ubiquitous soil bacteria. Here we report the complete and annotated genome sequence and characterization of Streptomyces phage Pablito, isolated from a soil sample in Haarlem, the Netherlands using Streptomyces lividans as host. This phage was able to infect a diverse range of Streptomyces strains, but none belonging to the sister genus Kitasatospora. Phage Pablito has double-stranded DNA with a genome length of 49,581 base pairs encoding 76 putative proteins, of which 26 could be predicted. The presence of a serine integrase protein indicated the lysogenic nature of phage Pablito. The phage remained stable over a wide range of temperatures (25–45 °C) and at pH ≥ 7.0, but lost infectivity at temperatures above 55 °C or when the pH dropped below 6.0. This newly isolated phage is closely related to Streptomyces phage Janus and Hank144 and considered a new species classified in the genus Janusvirus, within the subfamily Arquattrovirinae. Nature Publishing Group UK 2022-10-22 /pmc/articles/PMC9588064/ /pubmed/36273096 http://dx.doi.org/10.1038/s41598-022-22784-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ongenae, Véronique
Azeredo, Joana
Kropinski, Andrew M.
Rozen, Daniel
Briegel, Ariane
Claessen, Dennis
Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title_full Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title_fullStr Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title_full_unstemmed Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title_short Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
title_sort genome sequence and characterization of streptomyces phage pablito, representing a new species within the genus janusvirus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588064/
https://www.ncbi.nlm.nih.gov/pubmed/36273096
http://dx.doi.org/10.1038/s41598-022-22784-y
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