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Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography

In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximit...

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Autores principales: St-Onge, Etienne, Garyfallidis, Eleftherios, Collins, D. Louis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588479/
https://www.ncbi.nlm.nih.gov/pubmed/35716314
http://dx.doi.org/10.1007/s12021-022-09590-7
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author St-Onge, Etienne
Garyfallidis, Eleftherios
Collins, D. Louis
author_facet St-Onge, Etienne
Garyfallidis, Eleftherios
Collins, D. Louis
author_sort St-Onge, Etienne
collection PubMed
description In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximity search. The proposed streamline representation enables the use of space-partitioning search trees to increase the tractography clustering speed without reducing its accuracy. The resulting approach enables a fast reconstruction a sparse distance matrix between two sets of streamlines, for all similar streamlines within a given radius. Alongside a white matter atlas, this fast streamline search can be used for accurate and reproducible tractogram clustering.
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spelling pubmed-95884792022-10-25 Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography St-Onge, Etienne Garyfallidis, Eleftherios Collins, D. Louis Neuroinformatics Original Article In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximity search. The proposed streamline representation enables the use of space-partitioning search trees to increase the tractography clustering speed without reducing its accuracy. The resulting approach enables a fast reconstruction a sparse distance matrix between two sets of streamlines, for all similar streamlines within a given radius. Alongside a white matter atlas, this fast streamline search can be used for accurate and reproducible tractogram clustering. Springer US 2022-06-18 2022 /pmc/articles/PMC9588479/ /pubmed/35716314 http://dx.doi.org/10.1007/s12021-022-09590-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
St-Onge, Etienne
Garyfallidis, Eleftherios
Collins, D. Louis
Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title_full Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title_fullStr Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title_full_unstemmed Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title_short Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
title_sort fast streamline search: an exact technique for diffusion mri tractography
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588479/
https://www.ncbi.nlm.nih.gov/pubmed/35716314
http://dx.doi.org/10.1007/s12021-022-09590-7
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