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Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography
In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximit...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588479/ https://www.ncbi.nlm.nih.gov/pubmed/35716314 http://dx.doi.org/10.1007/s12021-022-09590-7 |
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author | St-Onge, Etienne Garyfallidis, Eleftherios Collins, D. Louis |
author_facet | St-Onge, Etienne Garyfallidis, Eleftherios Collins, D. Louis |
author_sort | St-Onge, Etienne |
collection | PubMed |
description | In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximity search. The proposed streamline representation enables the use of space-partitioning search trees to increase the tractography clustering speed without reducing its accuracy. The resulting approach enables a fast reconstruction a sparse distance matrix between two sets of streamlines, for all similar streamlines within a given radius. Alongside a white matter atlas, this fast streamline search can be used for accurate and reproducible tractogram clustering. |
format | Online Article Text |
id | pubmed-9588479 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-95884792022-10-25 Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography St-Onge, Etienne Garyfallidis, Eleftherios Collins, D. Louis Neuroinformatics Original Article In this work, a hierarchical search algorithm is proposed to efficiently compute the distance between similar tractography streamlines. This hierarchical framework offers an upper bound and a lower bound for the point-wise distance between two streamlines, which guarantees the validity of a proximity search. The proposed streamline representation enables the use of space-partitioning search trees to increase the tractography clustering speed without reducing its accuracy. The resulting approach enables a fast reconstruction a sparse distance matrix between two sets of streamlines, for all similar streamlines within a given radius. Alongside a white matter atlas, this fast streamline search can be used for accurate and reproducible tractogram clustering. Springer US 2022-06-18 2022 /pmc/articles/PMC9588479/ /pubmed/35716314 http://dx.doi.org/10.1007/s12021-022-09590-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article St-Onge, Etienne Garyfallidis, Eleftherios Collins, D. Louis Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title | Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title_full | Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title_fullStr | Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title_full_unstemmed | Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title_short | Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography |
title_sort | fast streamline search: an exact technique for diffusion mri tractography |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9588479/ https://www.ncbi.nlm.nih.gov/pubmed/35716314 http://dx.doi.org/10.1007/s12021-022-09590-7 |
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