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Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma

CUL7, a gene composed of 26 exons associated with cullin 7 protein, is also an E3 ligase that is closely related to cell senescence, apoptosis, and cell transformation and also plays an important role in human cancer. However, there is no systematic pan-cancer analysis has been performed to explore...

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Autores principales: Wang, Chengxing, Zhao, Zhenyu, Zhang, Yuhao, Liang, Weijun, Zhou, Chaorong, Lin, Weixing, He, Yu, Wu, Meimei, Meng, Zijie, Liao, Yuehua, Li, Min, El Akkawi, Mariya, Zhao, Jinglin, He, Yaoming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9592904/
https://www.ncbi.nlm.nih.gov/pubmed/36304472
http://dx.doi.org/10.3389/fimmu.2022.1043512
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author Wang, Chengxing
Zhao, Zhenyu
Zhang, Yuhao
Liang, Weijun
Zhou, Chaorong
Lin, Weixing
He, Yu
Wu, Meimei
Meng, Zijie
Liao, Yuehua
Li, Min
El Akkawi, Mariya
Zhao, Jinglin
He, Yaoming
author_facet Wang, Chengxing
Zhao, Zhenyu
Zhang, Yuhao
Liang, Weijun
Zhou, Chaorong
Lin, Weixing
He, Yu
Wu, Meimei
Meng, Zijie
Liao, Yuehua
Li, Min
El Akkawi, Mariya
Zhao, Jinglin
He, Yaoming
author_sort Wang, Chengxing
collection PubMed
description CUL7, a gene composed of 26 exons associated with cullin 7 protein, is also an E3 ligase that is closely related to cell senescence, apoptosis, and cell transformation and also plays an important role in human cancer. However, there is no systematic pan-cancer analysis has been performed to explore its role in prognosis and immune prediction. In this study, the expression of CUL7 in colon adenocarcinoma (COAD) was investigated to determine its prognosis value. First, based on the Cancer Genome Atlas (TCGA), Genotypic-Tissue Expression Project(GTEx), Cancer Cell Line Encyclopedias(CCLE), and TISIDB database, the potential role of CUL7 in different tumors was explored. Subsequently, the expression of CUL7 in COAD was explored and verified by Immunohistochemistry (IHC). Furthermore, the mutation frequency of CUL7 in COAD was analyzed, and the prognostic value of CUL7 in COAD was discussed. In addition, the nomogram was constructed, and its prognostic value was verified by follow-up data from Jiangmen Central Hospital. Finally, PPI network analysis explored the potential biological function of CUL7 in COAD. The results show that CUL7 is upregulated in most tumors, which is significantly associated with poor survival. At the same time, CUL7 is correlated with the clinical stage and immune landscape of various tumors. In colorectal cancer, CUL7 was overexpressed in tumor tissues by IHC with a mutation frequency of about 4%. CUL7 is an independent prognostic factor for colorectal cancer. The nomogram constructed has effective predictive performance, and external databases proved the prognostic value of CUL7. In addition, PPI network analysis showed that CUL7 was closely related to FBXW8, and further pathway enrichment analysis showed that CUL7 was mainly involved in ubiquitin-mediated proteolysis. Therefore, our study provides a comprehensive understanding of the potential role of CUL7 in different tumors, and CUL7 might be a prognostic marker for COAD.
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spelling pubmed-95929042022-10-26 Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma Wang, Chengxing Zhao, Zhenyu Zhang, Yuhao Liang, Weijun Zhou, Chaorong Lin, Weixing He, Yu Wu, Meimei Meng, Zijie Liao, Yuehua Li, Min El Akkawi, Mariya Zhao, Jinglin He, Yaoming Front Immunol Immunology CUL7, a gene composed of 26 exons associated with cullin 7 protein, is also an E3 ligase that is closely related to cell senescence, apoptosis, and cell transformation and also plays an important role in human cancer. However, there is no systematic pan-cancer analysis has been performed to explore its role in prognosis and immune prediction. In this study, the expression of CUL7 in colon adenocarcinoma (COAD) was investigated to determine its prognosis value. First, based on the Cancer Genome Atlas (TCGA), Genotypic-Tissue Expression Project(GTEx), Cancer Cell Line Encyclopedias(CCLE), and TISIDB database, the potential role of CUL7 in different tumors was explored. Subsequently, the expression of CUL7 in COAD was explored and verified by Immunohistochemistry (IHC). Furthermore, the mutation frequency of CUL7 in COAD was analyzed, and the prognostic value of CUL7 in COAD was discussed. In addition, the nomogram was constructed, and its prognostic value was verified by follow-up data from Jiangmen Central Hospital. Finally, PPI network analysis explored the potential biological function of CUL7 in COAD. The results show that CUL7 is upregulated in most tumors, which is significantly associated with poor survival. At the same time, CUL7 is correlated with the clinical stage and immune landscape of various tumors. In colorectal cancer, CUL7 was overexpressed in tumor tissues by IHC with a mutation frequency of about 4%. CUL7 is an independent prognostic factor for colorectal cancer. The nomogram constructed has effective predictive performance, and external databases proved the prognostic value of CUL7. In addition, PPI network analysis showed that CUL7 was closely related to FBXW8, and further pathway enrichment analysis showed that CUL7 was mainly involved in ubiquitin-mediated proteolysis. Therefore, our study provides a comprehensive understanding of the potential role of CUL7 in different tumors, and CUL7 might be a prognostic marker for COAD. Frontiers Media S.A. 2022-10-11 /pmc/articles/PMC9592904/ /pubmed/36304472 http://dx.doi.org/10.3389/fimmu.2022.1043512 Text en Copyright © 2022 Wang, Zhao, Zhang, Liang, Zhou, Lin, He, Wu, Meng, Liao, Li, El Akkawi, Zhao and He https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Wang, Chengxing
Zhao, Zhenyu
Zhang, Yuhao
Liang, Weijun
Zhou, Chaorong
Lin, Weixing
He, Yu
Wu, Meimei
Meng, Zijie
Liao, Yuehua
Li, Min
El Akkawi, Mariya
Zhao, Jinglin
He, Yaoming
Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title_full Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title_fullStr Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title_full_unstemmed Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title_short Identification and verification of the prognostic value of CUL7 in colon adenocarcinoma
title_sort identification and verification of the prognostic value of cul7 in colon adenocarcinoma
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9592904/
https://www.ncbi.nlm.nih.gov/pubmed/36304472
http://dx.doi.org/10.3389/fimmu.2022.1043512
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