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Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation

BACKGROUND: Electrocardiogram (ECG) deep learning (DL) has promise to improve the outcomes of patients with cardiovascular abnormalities. In ECG DL, researchers often use convolutional neural networks (CNNs) and traditionally use the full duration of raw ECG waveforms that create redundancies in fea...

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Autores principales: Honarvar, Hossein, Agarwal, Chirag, Somani, Sulaiman, Vaid, Akhil, Lampert, Joshua, Wanyan, Tingyi, Reddy, Vivek Y., Nadkarni, Girish N., Miotto, Riccardo, Zitnik, Marinka, Wang, Fei, Glicksberg, Benjamin S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9596304/
https://www.ncbi.nlm.nih.gov/pubmed/36310683
http://dx.doi.org/10.1016/j.cvdhj.2022.07.074
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author Honarvar, Hossein
Agarwal, Chirag
Somani, Sulaiman
Vaid, Akhil
Lampert, Joshua
Wanyan, Tingyi
Reddy, Vivek Y.
Nadkarni, Girish N.
Miotto, Riccardo
Zitnik, Marinka
Wang, Fei
Glicksberg, Benjamin S.
author_facet Honarvar, Hossein
Agarwal, Chirag
Somani, Sulaiman
Vaid, Akhil
Lampert, Joshua
Wanyan, Tingyi
Reddy, Vivek Y.
Nadkarni, Girish N.
Miotto, Riccardo
Zitnik, Marinka
Wang, Fei
Glicksberg, Benjamin S.
author_sort Honarvar, Hossein
collection PubMed
description BACKGROUND: Electrocardiogram (ECG) deep learning (DL) has promise to improve the outcomes of patients with cardiovascular abnormalities. In ECG DL, researchers often use convolutional neural networks (CNNs) and traditionally use the full duration of raw ECG waveforms that create redundancies in feature learning and result in inaccurate predictions with large uncertainties. OBJECTIVE: For enhancing these predictions, we introduced a sub-waveform representation that leverages the rhythmic pattern of ECG waveforms (data-centric approach) rather than changing the CNN architecture (model-centric approach). RESULTS: We applied the proposed representation to a population with 92,446 patients to identify left ventricular dysfunction. We found that the sub-waveform representation increases the performance metrics compared to the full-waveform representation. We observed a 2% increase for area under the receiver operating characteristic curve and 10% increase for area under the precision-recall curve. We also carefully examined three reliability components of explainability, interpretability, and fairness. We provided an explanation for enhancements obtained by heartbeat alignment mechanism. By developing a new scoring system, we interpreted the clinical relevance of ECG features and showed that sub-waveform representation further pushes the scores towards clinical predictions. Finally, we showed that the new representation significantly reduces prediction uncertainties within subgroups that contributes to individual fairness. CONCLUSION: We expect that this added control over the granularity of ECG data will improve the DL modeling for new artificial intelligence technologies in the cardiovascular space.
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spelling pubmed-95963042022-10-27 Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation Honarvar, Hossein Agarwal, Chirag Somani, Sulaiman Vaid, Akhil Lampert, Joshua Wanyan, Tingyi Reddy, Vivek Y. Nadkarni, Girish N. Miotto, Riccardo Zitnik, Marinka Wang, Fei Glicksberg, Benjamin S. Cardiovasc Digit Health J Original Article BACKGROUND: Electrocardiogram (ECG) deep learning (DL) has promise to improve the outcomes of patients with cardiovascular abnormalities. In ECG DL, researchers often use convolutional neural networks (CNNs) and traditionally use the full duration of raw ECG waveforms that create redundancies in feature learning and result in inaccurate predictions with large uncertainties. OBJECTIVE: For enhancing these predictions, we introduced a sub-waveform representation that leverages the rhythmic pattern of ECG waveforms (data-centric approach) rather than changing the CNN architecture (model-centric approach). RESULTS: We applied the proposed representation to a population with 92,446 patients to identify left ventricular dysfunction. We found that the sub-waveform representation increases the performance metrics compared to the full-waveform representation. We observed a 2% increase for area under the receiver operating characteristic curve and 10% increase for area under the precision-recall curve. We also carefully examined three reliability components of explainability, interpretability, and fairness. We provided an explanation for enhancements obtained by heartbeat alignment mechanism. By developing a new scoring system, we interpreted the clinical relevance of ECG features and showed that sub-waveform representation further pushes the scores towards clinical predictions. Finally, we showed that the new representation significantly reduces prediction uncertainties within subgroups that contributes to individual fairness. CONCLUSION: We expect that this added control over the granularity of ECG data will improve the DL modeling for new artificial intelligence technologies in the cardiovascular space. Elsevier 2022-08-11 /pmc/articles/PMC9596304/ /pubmed/36310683 http://dx.doi.org/10.1016/j.cvdhj.2022.07.074 Text en © 2022 Heart Rhythm Society. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Honarvar, Hossein
Agarwal, Chirag
Somani, Sulaiman
Vaid, Akhil
Lampert, Joshua
Wanyan, Tingyi
Reddy, Vivek Y.
Nadkarni, Girish N.
Miotto, Riccardo
Zitnik, Marinka
Wang, Fei
Glicksberg, Benjamin S.
Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title_full Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title_fullStr Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title_full_unstemmed Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title_short Enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
title_sort enhancing convolutional neural network predictions of electrocardiograms with left ventricular dysfunction using a novel sub-waveform representation
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9596304/
https://www.ncbi.nlm.nih.gov/pubmed/36310683
http://dx.doi.org/10.1016/j.cvdhj.2022.07.074
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