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The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes
To designate the probable most important differentially expressed genes and genetic pathways in Wilms tumor and assess their expression and diagnostic potential by RT-PCR and statistical analysis. Systematic review of the literature and various bioinformatics analysis was carried out to gather and n...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9596724/ https://www.ncbi.nlm.nih.gov/pubmed/36284226 http://dx.doi.org/10.1038/s41598-022-22925-3 |
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author | Bitaraf, Masoud Mahmanzar, Mohammadamin Zafari, Narges Mohammadpour, Hadiseh Vasei, Mohammad Moradi Matin, Leyla Kajbafzadeh, Abdol-Mohammad Majidi Zolbin, Masoumeh |
author_facet | Bitaraf, Masoud Mahmanzar, Mohammadamin Zafari, Narges Mohammadpour, Hadiseh Vasei, Mohammad Moradi Matin, Leyla Kajbafzadeh, Abdol-Mohammad Majidi Zolbin, Masoumeh |
author_sort | Bitaraf, Masoud |
collection | PubMed |
description | To designate the probable most important differentially expressed genes and genetic pathways in Wilms tumor and assess their expression and diagnostic potential by RT-PCR and statistical analysis. Systematic review of the literature and various bioinformatics analysis was carried out to gather and narrow down data. The expression of end-resulting genes was compared in Wilms tumor and normal tissue samples using RT-PCR. Statistical tests reported the diagnostic accuracy of genes and their correlation with clinicopathological features. Four genes including CDH1, NCAM1, EGF, and IGF2 were designated. The panel combining them has 100% sensitivity and specificity in differentiating tumors from normal tissue. Eight pathways, most involved in cell–cell and cell-basal matrix junction interactions, were found to be associated with disease pathogenesis. The suggested genes should undergo further evaluation to be validated as diagnostic biomarkers. Further research on the eight proposed pathways is recommended. |
format | Online Article Text |
id | pubmed-9596724 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95967242022-10-27 The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes Bitaraf, Masoud Mahmanzar, Mohammadamin Zafari, Narges Mohammadpour, Hadiseh Vasei, Mohammad Moradi Matin, Leyla Kajbafzadeh, Abdol-Mohammad Majidi Zolbin, Masoumeh Sci Rep Article To designate the probable most important differentially expressed genes and genetic pathways in Wilms tumor and assess their expression and diagnostic potential by RT-PCR and statistical analysis. Systematic review of the literature and various bioinformatics analysis was carried out to gather and narrow down data. The expression of end-resulting genes was compared in Wilms tumor and normal tissue samples using RT-PCR. Statistical tests reported the diagnostic accuracy of genes and their correlation with clinicopathological features. Four genes including CDH1, NCAM1, EGF, and IGF2 were designated. The panel combining them has 100% sensitivity and specificity in differentiating tumors from normal tissue. Eight pathways, most involved in cell–cell and cell-basal matrix junction interactions, were found to be associated with disease pathogenesis. The suggested genes should undergo further evaluation to be validated as diagnostic biomarkers. Further research on the eight proposed pathways is recommended. Nature Publishing Group UK 2022-10-25 /pmc/articles/PMC9596724/ /pubmed/36284226 http://dx.doi.org/10.1038/s41598-022-22925-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bitaraf, Masoud Mahmanzar, Mohammadamin Zafari, Narges Mohammadpour, Hadiseh Vasei, Mohammad Moradi Matin, Leyla Kajbafzadeh, Abdol-Mohammad Majidi Zolbin, Masoumeh The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title | The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title_full | The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title_fullStr | The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title_full_unstemmed | The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title_short | The potential key genes and pathways associated with Wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
title_sort | potential key genes and pathways associated with wilms tumor in quest of proper candidates for diagnostic and therapeutic purposes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9596724/ https://www.ncbi.nlm.nih.gov/pubmed/36284226 http://dx.doi.org/10.1038/s41598-022-22925-3 |
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