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ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming

MreB is a bacterial protein belonging to the actin superfamily. This protein polymerizes into an antiparallel double-stranded filament that determines cell shape by maintaining cell wall synthesis. Spiroplasma eriocheiris, a helical wall-less bacterium, has five MreB homologous (SpeMreB1-5) that pro...

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Autores principales: Takahashi, Daichi, Fujiwara, Ikuko, Sasajima, Yuya, Narita, Akihiro, Imada, Katsumi, Miyata, Makoto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9597168/
https://www.ncbi.nlm.nih.gov/pubmed/36285441
http://dx.doi.org/10.1098/rsob.220083
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author Takahashi, Daichi
Fujiwara, Ikuko
Sasajima, Yuya
Narita, Akihiro
Imada, Katsumi
Miyata, Makoto
author_facet Takahashi, Daichi
Fujiwara, Ikuko
Sasajima, Yuya
Narita, Akihiro
Imada, Katsumi
Miyata, Makoto
author_sort Takahashi, Daichi
collection PubMed
description MreB is a bacterial protein belonging to the actin superfamily. This protein polymerizes into an antiparallel double-stranded filament that determines cell shape by maintaining cell wall synthesis. Spiroplasma eriocheiris, a helical wall-less bacterium, has five MreB homologous (SpeMreB1-5) that probably contribute to swimming motility. Here, we investigated the structure, ATPase activity and polymerization dynamics of SpeMreB3 and SpeMreB5. SpeMreB3 polymerized into a double-stranded filament with possible antiparallel polarity, while SpeMreB5 formed sheets which contained the antiparallel filament, upon nucleotide binding. SpeMreB3 showed slow P(i) release owing to the lack of an amino acid motif conserved in the catalytic centre of MreB family proteins. Our SpeMreB3 crystal structures and analyses of SpeMreB3 and SpeMreB5 variants showed that the amino acid motif probably plays a role in eliminating a nucleophilic water proton during ATP hydrolysis. Sedimentation assays suggest that SpeMreB3 has a lower polymerization activity than SpeMreB5, though their polymerization dynamics are qualitatively similar to those of other actin superfamily proteins, in which pre-ATP hydrolysis and post-P(i) release states are unfavourable for them to remain as filaments.
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spelling pubmed-95971682022-10-26 ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming Takahashi, Daichi Fujiwara, Ikuko Sasajima, Yuya Narita, Akihiro Imada, Katsumi Miyata, Makoto Open Biol Research MreB is a bacterial protein belonging to the actin superfamily. This protein polymerizes into an antiparallel double-stranded filament that determines cell shape by maintaining cell wall synthesis. Spiroplasma eriocheiris, a helical wall-less bacterium, has five MreB homologous (SpeMreB1-5) that probably contribute to swimming motility. Here, we investigated the structure, ATPase activity and polymerization dynamics of SpeMreB3 and SpeMreB5. SpeMreB3 polymerized into a double-stranded filament with possible antiparallel polarity, while SpeMreB5 formed sheets which contained the antiparallel filament, upon nucleotide binding. SpeMreB3 showed slow P(i) release owing to the lack of an amino acid motif conserved in the catalytic centre of MreB family proteins. Our SpeMreB3 crystal structures and analyses of SpeMreB3 and SpeMreB5 variants showed that the amino acid motif probably plays a role in eliminating a nucleophilic water proton during ATP hydrolysis. Sedimentation assays suggest that SpeMreB3 has a lower polymerization activity than SpeMreB5, though their polymerization dynamics are qualitatively similar to those of other actin superfamily proteins, in which pre-ATP hydrolysis and post-P(i) release states are unfavourable for them to remain as filaments. The Royal Society 2022-10-26 /pmc/articles/PMC9597168/ /pubmed/36285441 http://dx.doi.org/10.1098/rsob.220083 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Research
Takahashi, Daichi
Fujiwara, Ikuko
Sasajima, Yuya
Narita, Akihiro
Imada, Katsumi
Miyata, Makoto
ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title_full ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title_fullStr ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title_full_unstemmed ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title_short ATP-dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming
title_sort atp-dependent polymerization dynamics of bacterial actin proteins involved in spiroplasma swimming
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9597168/
https://www.ncbi.nlm.nih.gov/pubmed/36285441
http://dx.doi.org/10.1098/rsob.220083
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