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Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis
For the first time, a novel aptamer was designed and utilized for the selective detection of rivaroxaban (RIV) using the integration of bioinformatics with biosensing technology. The selected aptamer with the sequence 5′-TAG GGA AGA GAA GGA CAT ATG ATG ACT CAC AAC TGG ACG AAC GTA CTT ATC CCC CCC AAT...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9599351/ https://www.ncbi.nlm.nih.gov/pubmed/36290911 http://dx.doi.org/10.3390/bios12100773 |
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author | Ebrahimi, Rokhsareh Barzegari, Abolfazl Teimuri-Mofrad, Reza Kordasht, Houman Kholafazad Hasanzadeh, Mohammad Khoubnasabjafari, Maryam Jouyban-Gharamaleki, Vahid Rad, Abbas Afrasiabi Shadjou, Nasrin Rashidi, Mohammad-Reza Afshar Mogaddam, Mohammad Reza Jouyban, Abolghasem |
author_facet | Ebrahimi, Rokhsareh Barzegari, Abolfazl Teimuri-Mofrad, Reza Kordasht, Houman Kholafazad Hasanzadeh, Mohammad Khoubnasabjafari, Maryam Jouyban-Gharamaleki, Vahid Rad, Abbas Afrasiabi Shadjou, Nasrin Rashidi, Mohammad-Reza Afshar Mogaddam, Mohammad Reza Jouyban, Abolghasem |
author_sort | Ebrahimi, Rokhsareh |
collection | PubMed |
description | For the first time, a novel aptamer was designed and utilized for the selective detection of rivaroxaban (RIV) using the integration of bioinformatics with biosensing technology. The selected aptamer with the sequence 5′-TAG GGA AGA GAA GGA CAT ATG ATG ACT CAC AAC TGG ACG AAC GTA CTT ATC CCC CCC AAT CAC TAG TGA ATT-3′ displayed a high binding affinity to RIV and had an efficient ability to discriminate RIV from similar molecular structures. A novel label-free electrochemical aptasensor was designed and fabricated through the conjugation of a thiolated aptamer with Au nanoparticles (Au-NPs). Then, the aptasensor was successfully applied for the quantitative determination of RIV in human plasma and exhaled breath condensate (EBC) samples with limits of detection (LODs) of 14.08 and 6.03 nM, respectively. These valuable results provide ample evidence of the green electrogeneration of AuNPs on the surface of electrodes and their interaction with loaded aptamers (based on Au-S binding) towards the sensitive and selective monitoring of RIV in human plasma and EBC samples. This bio-assay is an alternative approach for the clinical analysis of RIV and has improved specificity and affinity. As far as we know, this is the first time that an electrochemical aptasensor has been verified for the recognition of RIV and that allows for the easy, fast, and precise screening of RIV in biological samples. |
format | Online Article Text |
id | pubmed-9599351 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95993512022-10-27 Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis Ebrahimi, Rokhsareh Barzegari, Abolfazl Teimuri-Mofrad, Reza Kordasht, Houman Kholafazad Hasanzadeh, Mohammad Khoubnasabjafari, Maryam Jouyban-Gharamaleki, Vahid Rad, Abbas Afrasiabi Shadjou, Nasrin Rashidi, Mohammad-Reza Afshar Mogaddam, Mohammad Reza Jouyban, Abolghasem Biosensors (Basel) Article For the first time, a novel aptamer was designed and utilized for the selective detection of rivaroxaban (RIV) using the integration of bioinformatics with biosensing technology. The selected aptamer with the sequence 5′-TAG GGA AGA GAA GGA CAT ATG ATG ACT CAC AAC TGG ACG AAC GTA CTT ATC CCC CCC AAT CAC TAG TGA ATT-3′ displayed a high binding affinity to RIV and had an efficient ability to discriminate RIV from similar molecular structures. A novel label-free electrochemical aptasensor was designed and fabricated through the conjugation of a thiolated aptamer with Au nanoparticles (Au-NPs). Then, the aptasensor was successfully applied for the quantitative determination of RIV in human plasma and exhaled breath condensate (EBC) samples with limits of detection (LODs) of 14.08 and 6.03 nM, respectively. These valuable results provide ample evidence of the green electrogeneration of AuNPs on the surface of electrodes and their interaction with loaded aptamers (based on Au-S binding) towards the sensitive and selective monitoring of RIV in human plasma and EBC samples. This bio-assay is an alternative approach for the clinical analysis of RIV and has improved specificity and affinity. As far as we know, this is the first time that an electrochemical aptasensor has been verified for the recognition of RIV and that allows for the easy, fast, and precise screening of RIV in biological samples. MDPI 2022-09-20 /pmc/articles/PMC9599351/ /pubmed/36290911 http://dx.doi.org/10.3390/bios12100773 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ebrahimi, Rokhsareh Barzegari, Abolfazl Teimuri-Mofrad, Reza Kordasht, Houman Kholafazad Hasanzadeh, Mohammad Khoubnasabjafari, Maryam Jouyban-Gharamaleki, Vahid Rad, Abbas Afrasiabi Shadjou, Nasrin Rashidi, Mohammad-Reza Afshar Mogaddam, Mohammad Reza Jouyban, Abolghasem Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title | Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title_full | Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title_fullStr | Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title_full_unstemmed | Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title_short | Selection of Specific Aptamer against Rivaroxaban and Utilization for Label-Free Electrochemical Aptasensing Using Gold Nanoparticles: First Announcement and Application for Clinical Sample Analysis |
title_sort | selection of specific aptamer against rivaroxaban and utilization for label-free electrochemical aptasensing using gold nanoparticles: first announcement and application for clinical sample analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9599351/ https://www.ncbi.nlm.nih.gov/pubmed/36290911 http://dx.doi.org/10.3390/bios12100773 |
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