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Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer
Background: Gastric cancer remains the most prevalent and highly lethal disease worldwide. MAP4K4, a member of Ste20, plays an important role in various pathologies, including cancer. However, its role in gastric cancer is not yet fully elucidated. Therefore, this study aims to determine the tumor-p...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9601900/ https://www.ncbi.nlm.nih.gov/pubmed/36292671 http://dx.doi.org/10.3390/genes13101786 |
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author | Zhang, Junping Cai, Xiaoping Cui, Weifeng Wei, Zheng |
author_facet | Zhang, Junping Cai, Xiaoping Cui, Weifeng Wei, Zheng |
author_sort | Zhang, Junping |
collection | PubMed |
description | Background: Gastric cancer remains the most prevalent and highly lethal disease worldwide. MAP4K4, a member of Ste20, plays an important role in various pathologies, including cancer. However, its role in gastric cancer is not yet fully elucidated. Therefore, this study aims to determine the tumor-promoting role of MAP4K4 in gastric cancer and whether it can be used as a new and reliable biomarker to predict the prognosis of gastric cancer. For this purpose, we divide the samples into high- and low-expression groups according to the expression level of MAP4K4. The association of MAP4K4 expression with prognosis is assessed using the Kaplan–Meier survival analysis. Furthermore, immune infiltration analysis using ESTIMATE is conducted to evaluate the tumor immune scores of the samples. Results: The findings reveal a significantly higher expression of MAP4K4 in tumor samples than in adjacent samples. The high-expression group was significantly enriched in tumor-related pathways, such as the PI3K-Akt signaling pathway. In addition, immune infiltration analysis revealed a positive correlation between immune scores and MAP4K4 expression. We also observed that miRNAs, such as miR-192-3p (R = −0.317, p-value 3.111 × 10(−9)), miR-33b-5p (R= −0.238, p-value 1.166 × 10(−5)), and miR-582-3p (R = −0.214, p-value 8.430 × 10(−5)), had potential negative regulatory effects on MAP4K4. Moreover, we identified several transcription factors, ubiquitinated proteins, and interacting proteins that might regulate MAP4K4. The relationship between MAP4K4 and DNA methylation was also identified. Finally, we verified the high expression of MAP4K4 and its effect on promoting cancer. Conclusion: MAP4K4 might be closely related to gastric cancer’s progression, invasion, and metastasis. Its high expression negatively impacts the prognosis of gastric cancer patients. This suggests MAP4K4 as an important prognostic factor for gastric cancer and could be regarded as a new potential prognostic detection and therapeutic target. |
format | Online Article Text |
id | pubmed-9601900 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96019002022-10-27 Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer Zhang, Junping Cai, Xiaoping Cui, Weifeng Wei, Zheng Genes (Basel) Article Background: Gastric cancer remains the most prevalent and highly lethal disease worldwide. MAP4K4, a member of Ste20, plays an important role in various pathologies, including cancer. However, its role in gastric cancer is not yet fully elucidated. Therefore, this study aims to determine the tumor-promoting role of MAP4K4 in gastric cancer and whether it can be used as a new and reliable biomarker to predict the prognosis of gastric cancer. For this purpose, we divide the samples into high- and low-expression groups according to the expression level of MAP4K4. The association of MAP4K4 expression with prognosis is assessed using the Kaplan–Meier survival analysis. Furthermore, immune infiltration analysis using ESTIMATE is conducted to evaluate the tumor immune scores of the samples. Results: The findings reveal a significantly higher expression of MAP4K4 in tumor samples than in adjacent samples. The high-expression group was significantly enriched in tumor-related pathways, such as the PI3K-Akt signaling pathway. In addition, immune infiltration analysis revealed a positive correlation between immune scores and MAP4K4 expression. We also observed that miRNAs, such as miR-192-3p (R = −0.317, p-value 3.111 × 10(−9)), miR-33b-5p (R= −0.238, p-value 1.166 × 10(−5)), and miR-582-3p (R = −0.214, p-value 8.430 × 10(−5)), had potential negative regulatory effects on MAP4K4. Moreover, we identified several transcription factors, ubiquitinated proteins, and interacting proteins that might regulate MAP4K4. The relationship between MAP4K4 and DNA methylation was also identified. Finally, we verified the high expression of MAP4K4 and its effect on promoting cancer. Conclusion: MAP4K4 might be closely related to gastric cancer’s progression, invasion, and metastasis. Its high expression negatively impacts the prognosis of gastric cancer patients. This suggests MAP4K4 as an important prognostic factor for gastric cancer and could be regarded as a new potential prognostic detection and therapeutic target. MDPI 2022-10-03 /pmc/articles/PMC9601900/ /pubmed/36292671 http://dx.doi.org/10.3390/genes13101786 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Junping Cai, Xiaoping Cui, Weifeng Wei, Zheng Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title | Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title_full | Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title_fullStr | Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title_full_unstemmed | Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title_short | Bioinformatics and Experimental Analyses Reveal MAP4K4 as a Potential Marker for Gastric Cancer |
title_sort | bioinformatics and experimental analyses reveal map4k4 as a potential marker for gastric cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9601900/ https://www.ncbi.nlm.nih.gov/pubmed/36292671 http://dx.doi.org/10.3390/genes13101786 |
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