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Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition
A simple tensor decomposition model was applied to the liver transcriptome analysis data to elucidate the cause of cadmium-induced gene overexpression. In addition, we estimated the mechanism by which prenatal Cd exposure disrupts insulin metabolism in offspring. Numerous studies have reported on th...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602417/ https://www.ncbi.nlm.nih.gov/pubmed/36292583 http://dx.doi.org/10.3390/genes13101698 |
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author | Amakura, Yuki Taguchi, Y-h. |
author_facet | Amakura, Yuki Taguchi, Y-h. |
author_sort | Amakura, Yuki |
collection | PubMed |
description | A simple tensor decomposition model was applied to the liver transcriptome analysis data to elucidate the cause of cadmium-induced gene overexpression. In addition, we estimated the mechanism by which prenatal Cd exposure disrupts insulin metabolism in offspring. Numerous studies have reported on the toxicity of Cd. A liver transcriptome analysis revealed that Cd toxicity induces intracellular oxidative stress and mitochondrial dysfunction via changes in gene expression, which in turn induces endoplasmic reticulum-associated degradation via abnormal protein folding. However, the specific mechanisms underlying these effects remain unknown. In this study, we found that Cd-induced endoplasmic reticulum stress may promote increased expression of tumor necrosis factor- [Formula: see text] (TNF- [Formula: see text]). Based on the high expression of genes involved in the production of sphingolipids, it was also found that the accumulation of ceramide may induce intracellular oxidative stress through the overproduction of reactive oxygen species. In addition, the high expression of a set of genes involved in the electron transfer system may contribute to oxidative stress. These findings allowed us to identify the mechanisms by which intracellular oxidative stress leads to the phosphorylation of insulin receptor substrate 1, which plays a significant role in the insulin signaling pathway. |
format | Online Article Text |
id | pubmed-9602417 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96024172022-10-27 Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition Amakura, Yuki Taguchi, Y-h. Genes (Basel) Article A simple tensor decomposition model was applied to the liver transcriptome analysis data to elucidate the cause of cadmium-induced gene overexpression. In addition, we estimated the mechanism by which prenatal Cd exposure disrupts insulin metabolism in offspring. Numerous studies have reported on the toxicity of Cd. A liver transcriptome analysis revealed that Cd toxicity induces intracellular oxidative stress and mitochondrial dysfunction via changes in gene expression, which in turn induces endoplasmic reticulum-associated degradation via abnormal protein folding. However, the specific mechanisms underlying these effects remain unknown. In this study, we found that Cd-induced endoplasmic reticulum stress may promote increased expression of tumor necrosis factor- [Formula: see text] (TNF- [Formula: see text]). Based on the high expression of genes involved in the production of sphingolipids, it was also found that the accumulation of ceramide may induce intracellular oxidative stress through the overproduction of reactive oxygen species. In addition, the high expression of a set of genes involved in the electron transfer system may contribute to oxidative stress. These findings allowed us to identify the mechanisms by which intracellular oxidative stress leads to the phosphorylation of insulin receptor substrate 1, which plays a significant role in the insulin signaling pathway. MDPI 2022-09-22 /pmc/articles/PMC9602417/ /pubmed/36292583 http://dx.doi.org/10.3390/genes13101698 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Amakura, Yuki Taguchi, Y-h. Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title | Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title_full | Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title_fullStr | Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title_full_unstemmed | Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title_short | Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition |
title_sort | estimation of metabolic effects upon cadmium exposure during pregnancy using tensor decomposition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602417/ https://www.ncbi.nlm.nih.gov/pubmed/36292583 http://dx.doi.org/10.3390/genes13101698 |
work_keys_str_mv | AT amakurayuki estimationofmetaboliceffectsuponcadmiumexposureduringpregnancyusingtensordecomposition AT taguchiyh estimationofmetaboliceffectsuponcadmiumexposureduringpregnancyusingtensordecomposition |