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Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs),...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602930/ https://www.ncbi.nlm.nih.gov/pubmed/36313475 http://dx.doi.org/10.1080/23802359.2022.2131367 |
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author | Lin, Jianing Feng, Song Wang, Lijuan Qiu, Yanhao |
author_facet | Lin, Jianing Feng, Song Wang, Lijuan Qiu, Yanhao |
author_sort | Lin, Jianing |
collection | PubMed |
description | This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs), two rRNAs (s-rRNA and l-rRNA), and two tRNAs (trna-W-TCA and trna-M-CAT). A + T content was 65.39% (A: 29.27%, C: 16.59%, G: 18.03%, and T: 36.12%). ATG was the start codon in 11 PCGs: COX1, COX2, ATP8, ATP6, COX3, NAD2, NAD6, NAD4l, NAD1, NAD4, and COB. NAD5 and NAD3 had GTG as the start codon. TAG was the stop codon for COX2, NAD6, and COB. The other 10 PCGs were terminated by TAA. The neighbor-joining phylogenetic tree of the 15 related jellyfish species showed that A. flagellatus is closely related to Nemopilema nomurai and Rhopilema esculentum. |
format | Online Article Text |
id | pubmed-9602930 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-96029302022-10-27 Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species Lin, Jianing Feng, Song Wang, Lijuan Qiu, Yanhao Mitochondrial DNA B Resour Mitogenome Announcement This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs), two rRNAs (s-rRNA and l-rRNA), and two tRNAs (trna-W-TCA and trna-M-CAT). A + T content was 65.39% (A: 29.27%, C: 16.59%, G: 18.03%, and T: 36.12%). ATG was the start codon in 11 PCGs: COX1, COX2, ATP8, ATP6, COX3, NAD2, NAD6, NAD4l, NAD1, NAD4, and COB. NAD5 and NAD3 had GTG as the start codon. TAG was the stop codon for COX2, NAD6, and COB. The other 10 PCGs were terminated by TAA. The neighbor-joining phylogenetic tree of the 15 related jellyfish species showed that A. flagellatus is closely related to Nemopilema nomurai and Rhopilema esculentum. Taylor & Francis 2022-10-21 /pmc/articles/PMC9602930/ /pubmed/36313475 http://dx.doi.org/10.1080/23802359.2022.2131367 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Lin, Jianing Feng, Song Wang, Lijuan Qiu, Yanhao Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title | Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title_full | Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title_fullStr | Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title_full_unstemmed | Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title_short | Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
title_sort | complete mitochondrial genome sequence of acromitus flagellatus and its phylogenetic relationship with related jellyfish species |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602930/ https://www.ncbi.nlm.nih.gov/pubmed/36313475 http://dx.doi.org/10.1080/23802359.2022.2131367 |
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