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Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species

This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs),...

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Autores principales: Lin, Jianing, Feng, Song, Wang, Lijuan, Qiu, Yanhao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602930/
https://www.ncbi.nlm.nih.gov/pubmed/36313475
http://dx.doi.org/10.1080/23802359.2022.2131367
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author Lin, Jianing
Feng, Song
Wang, Lijuan
Qiu, Yanhao
author_facet Lin, Jianing
Feng, Song
Wang, Lijuan
Qiu, Yanhao
author_sort Lin, Jianing
collection PubMed
description This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs), two rRNAs (s-rRNA and l-rRNA), and two tRNAs (trna-W-TCA and trna-M-CAT). A + T content was 65.39% (A: 29.27%, C: 16.59%, G: 18.03%, and T: 36.12%). ATG was the start codon in 11 PCGs: COX1, COX2, ATP8, ATP6, COX3, NAD2, NAD6, NAD4l, NAD1, NAD4, and COB. NAD5 and NAD3 had GTG as the start codon. TAG was the stop codon for COX2, NAD6, and COB. The other 10 PCGs were terminated by TAA. The neighbor-joining phylogenetic tree of the 15 related jellyfish species showed that A. flagellatus is closely related to Nemopilema nomurai and Rhopilema esculentum.
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spelling pubmed-96029302022-10-27 Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species Lin, Jianing Feng, Song Wang, Lijuan Qiu, Yanhao Mitochondrial DNA B Resour Mitogenome Announcement This study describes the complete mitochondrial genome sequence of the scyphozoan Acromitus flagellatus (Maas, 1903), a blooming jellyfish found in the coastal areas of Hainan, China. Its mitochondrial DNA is 16,779 bp in length and has a linear structure, comprising 13 protein-coding genes (PCGs), two rRNAs (s-rRNA and l-rRNA), and two tRNAs (trna-W-TCA and trna-M-CAT). A + T content was 65.39% (A: 29.27%, C: 16.59%, G: 18.03%, and T: 36.12%). ATG was the start codon in 11 PCGs: COX1, COX2, ATP8, ATP6, COX3, NAD2, NAD6, NAD4l, NAD1, NAD4, and COB. NAD5 and NAD3 had GTG as the start codon. TAG was the stop codon for COX2, NAD6, and COB. The other 10 PCGs were terminated by TAA. The neighbor-joining phylogenetic tree of the 15 related jellyfish species showed that A. flagellatus is closely related to Nemopilema nomurai and Rhopilema esculentum. Taylor & Francis 2022-10-21 /pmc/articles/PMC9602930/ /pubmed/36313475 http://dx.doi.org/10.1080/23802359.2022.2131367 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lin, Jianing
Feng, Song
Wang, Lijuan
Qiu, Yanhao
Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title_full Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title_fullStr Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title_full_unstemmed Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title_short Complete mitochondrial genome sequence of Acromitus flagellatus and its phylogenetic relationship with related jellyfish species
title_sort complete mitochondrial genome sequence of acromitus flagellatus and its phylogenetic relationship with related jellyfish species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9602930/
https://www.ncbi.nlm.nih.gov/pubmed/36313475
http://dx.doi.org/10.1080/23802359.2022.2131367
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