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Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus

Monkeypox virus (MPXV) is a human pathogenic virus that belongs to the genus Orthopoxvirus. In 2022, MPXV caused an unprecedented number of infections in many countries. As it is difficult to distinguish MPXV from other pathogens by its symptoms in the early stage of infection, a rapid and reliable...

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Autores principales: Feng, Junxia, Xue, Guanhua, Cui, Xiaohu, Du, Bing, Feng, Yanling, Cui, Jinghua, Zhao, Hanqing, Gan, Lin, Fan, Zheng, Fu, Tongtong, Xu, Ziying, Du, Shuheng, Zhou, Yao, Zhang, Rui, Fu, Hanyu, Tian, Ziyan, Zhang, Qun, Yan, Chao, Yuan, Jing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9603857/
https://www.ncbi.nlm.nih.gov/pubmed/36154444
http://dx.doi.org/10.1128/spectrum.02714-22
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author Feng, Junxia
Xue, Guanhua
Cui, Xiaohu
Du, Bing
Feng, Yanling
Cui, Jinghua
Zhao, Hanqing
Gan, Lin
Fan, Zheng
Fu, Tongtong
Xu, Ziying
Du, Shuheng
Zhou, Yao
Zhang, Rui
Fu, Hanyu
Tian, Ziyan
Zhang, Qun
Yan, Chao
Yuan, Jing
author_facet Feng, Junxia
Xue, Guanhua
Cui, Xiaohu
Du, Bing
Feng, Yanling
Cui, Jinghua
Zhao, Hanqing
Gan, Lin
Fan, Zheng
Fu, Tongtong
Xu, Ziying
Du, Shuheng
Zhou, Yao
Zhang, Rui
Fu, Hanyu
Tian, Ziyan
Zhang, Qun
Yan, Chao
Yuan, Jing
author_sort Feng, Junxia
collection PubMed
description Monkeypox virus (MPXV) is a human pathogenic virus that belongs to the genus Orthopoxvirus. In 2022, MPXV caused an unprecedented number of infections in many countries. As it is difficult to distinguish MPXV from other pathogens by its symptoms in the early stage of infection, a rapid and reliable assay for MPXV detection is needed. In this study, we developed a loop-mediated isothermal amplification (LAMP) assay for the specific detection of MPXV and evaluated its application in simulated clinical samples. The A27L-1 and F3L-1 primer sets were identified as the optimal primers, and 63°C was the most appropriate reaction temperature for sequence amplification. The detection limits of the LAMP assay using primer sets A27L-1 and F3L-1 were both 20 copies/reaction mixture, which were >100-fold higher in terms of sensitivity, compared with conventional PCR. The LAMP assay findings were negative for all 21 non-MPXV pathogens, confirming the high specificity of our assay. All three types of simulated clinical samples were clearly identified by our LAMP assay, and the detection limits were consistent with the sensitivity results, indicating efficient clinical sample identification. Our rapid and reliable MPXV LAMP assay could be useful for MPXV detection and on-site diagnosis, especially in primary hospitals and rural areas. IMPORTANCE MPXV outbreaks rapidly grew in the first half of 2022, and this virus has been recognized as an increasing public health threat, particularly in the context of the COVID-19 pandemic. Thus, developing reliable and fast detection methods for MPXV is necessary.
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spelling pubmed-96038572022-10-27 Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus Feng, Junxia Xue, Guanhua Cui, Xiaohu Du, Bing Feng, Yanling Cui, Jinghua Zhao, Hanqing Gan, Lin Fan, Zheng Fu, Tongtong Xu, Ziying Du, Shuheng Zhou, Yao Zhang, Rui Fu, Hanyu Tian, Ziyan Zhang, Qun Yan, Chao Yuan, Jing Microbiol Spectr Research Article Monkeypox virus (MPXV) is a human pathogenic virus that belongs to the genus Orthopoxvirus. In 2022, MPXV caused an unprecedented number of infections in many countries. As it is difficult to distinguish MPXV from other pathogens by its symptoms in the early stage of infection, a rapid and reliable assay for MPXV detection is needed. In this study, we developed a loop-mediated isothermal amplification (LAMP) assay for the specific detection of MPXV and evaluated its application in simulated clinical samples. The A27L-1 and F3L-1 primer sets were identified as the optimal primers, and 63°C was the most appropriate reaction temperature for sequence amplification. The detection limits of the LAMP assay using primer sets A27L-1 and F3L-1 were both 20 copies/reaction mixture, which were >100-fold higher in terms of sensitivity, compared with conventional PCR. The LAMP assay findings were negative for all 21 non-MPXV pathogens, confirming the high specificity of our assay. All three types of simulated clinical samples were clearly identified by our LAMP assay, and the detection limits were consistent with the sensitivity results, indicating efficient clinical sample identification. Our rapid and reliable MPXV LAMP assay could be useful for MPXV detection and on-site diagnosis, especially in primary hospitals and rural areas. IMPORTANCE MPXV outbreaks rapidly grew in the first half of 2022, and this virus has been recognized as an increasing public health threat, particularly in the context of the COVID-19 pandemic. Thus, developing reliable and fast detection methods for MPXV is necessary. American Society for Microbiology 2022-09-26 /pmc/articles/PMC9603857/ /pubmed/36154444 http://dx.doi.org/10.1128/spectrum.02714-22 Text en Copyright © 2022 Feng et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Feng, Junxia
Xue, Guanhua
Cui, Xiaohu
Du, Bing
Feng, Yanling
Cui, Jinghua
Zhao, Hanqing
Gan, Lin
Fan, Zheng
Fu, Tongtong
Xu, Ziying
Du, Shuheng
Zhou, Yao
Zhang, Rui
Fu, Hanyu
Tian, Ziyan
Zhang, Qun
Yan, Chao
Yuan, Jing
Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title_full Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title_fullStr Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title_full_unstemmed Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title_short Development of a Loop-Mediated Isothermal Amplification Method for Rapid and Visual Detection of Monkeypox Virus
title_sort development of a loop-mediated isothermal amplification method for rapid and visual detection of monkeypox virus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9603857/
https://www.ncbi.nlm.nih.gov/pubmed/36154444
http://dx.doi.org/10.1128/spectrum.02714-22
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