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Online Calibration of a Linear Micro Tomosynthesis Scanner
In a linear tomosynthesis scanner designed for imaging histologic samples of several centimeters size at 10 µm resolution, the mechanical instability of the scanning stage (±10 µm) exceeded the resolution of the image system, making it necessary to determine the trajectory of the stage for each scan...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9604648/ https://www.ncbi.nlm.nih.gov/pubmed/36286386 http://dx.doi.org/10.3390/jimaging8100292 |
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author | Bahar, Piroz Nguyen, David Wang, Muyang Mazilu, Dumitru Bennett, Eric E. Wen, Han |
author_facet | Bahar, Piroz Nguyen, David Wang, Muyang Mazilu, Dumitru Bennett, Eric E. Wen, Han |
author_sort | Bahar, Piroz |
collection | PubMed |
description | In a linear tomosynthesis scanner designed for imaging histologic samples of several centimeters size at 10 µm resolution, the mechanical instability of the scanning stage (±10 µm) exceeded the resolution of the image system, making it necessary to determine the trajectory of the stage for each scan to avoid blurring and artifacts in the images that would arise from the errors in the geometric information used in 3D reconstruction. We present a method for online calibration by attaching a layer of randomly dispersed micro glass beads or calcium particles to the bottom of the sample stage. The method was based on a parametric representation of the rigid body motion of the sample stage-marker layer assembly. The marker layer was easy to produce and proven effective in the calibration procedure. |
format | Online Article Text |
id | pubmed-9604648 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96046482022-10-27 Online Calibration of a Linear Micro Tomosynthesis Scanner Bahar, Piroz Nguyen, David Wang, Muyang Mazilu, Dumitru Bennett, Eric E. Wen, Han J Imaging Article In a linear tomosynthesis scanner designed for imaging histologic samples of several centimeters size at 10 µm resolution, the mechanical instability of the scanning stage (±10 µm) exceeded the resolution of the image system, making it necessary to determine the trajectory of the stage for each scan to avoid blurring and artifacts in the images that would arise from the errors in the geometric information used in 3D reconstruction. We present a method for online calibration by attaching a layer of randomly dispersed micro glass beads or calcium particles to the bottom of the sample stage. The method was based on a parametric representation of the rigid body motion of the sample stage-marker layer assembly. The marker layer was easy to produce and proven effective in the calibration procedure. MDPI 2022-10-21 /pmc/articles/PMC9604648/ /pubmed/36286386 http://dx.doi.org/10.3390/jimaging8100292 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bahar, Piroz Nguyen, David Wang, Muyang Mazilu, Dumitru Bennett, Eric E. Wen, Han Online Calibration of a Linear Micro Tomosynthesis Scanner |
title | Online Calibration of a Linear Micro Tomosynthesis Scanner |
title_full | Online Calibration of a Linear Micro Tomosynthesis Scanner |
title_fullStr | Online Calibration of a Linear Micro Tomosynthesis Scanner |
title_full_unstemmed | Online Calibration of a Linear Micro Tomosynthesis Scanner |
title_short | Online Calibration of a Linear Micro Tomosynthesis Scanner |
title_sort | online calibration of a linear micro tomosynthesis scanner |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9604648/ https://www.ncbi.nlm.nih.gov/pubmed/36286386 http://dx.doi.org/10.3390/jimaging8100292 |
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