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Mean-field based framework for forward modeling of LFP and MEG signals
The use of mean-field models to describe the activity of large neuronal populations has become a very powerful tool for large-scale or whole brain simulations. However, the calculation of brain signals from mean-field models, such as the electric and magnetic fields, is still under development. Thus...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606720/ https://www.ncbi.nlm.nih.gov/pubmed/36313811 http://dx.doi.org/10.3389/fncom.2022.968278 |
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author | Tesler, Federico Tort-Colet, Núria Depannemaecker, Damien Carlu, Mallory Destexhe, Alain |
author_facet | Tesler, Federico Tort-Colet, Núria Depannemaecker, Damien Carlu, Mallory Destexhe, Alain |
author_sort | Tesler, Federico |
collection | PubMed |
description | The use of mean-field models to describe the activity of large neuronal populations has become a very powerful tool for large-scale or whole brain simulations. However, the calculation of brain signals from mean-field models, such as the electric and magnetic fields, is still under development. Thus, the emergence of new methods for an accurate and efficient calculation of such brain signals is currently of great relevance. In this paper we propose a novel method to calculate the local field potentials (LFP) and magnetic fields from mean-field models. The calculation of LFP is done via a kernel method based on unitary LFP's (the LFP generated by a single axon) that was recently introduced for spiking-networks simulations and that we adapt here for mean-field models. The calculation of the magnetic field is based on current-dipole and volume-conductor models, where the secondary currents (due to the conducting extracellular medium) are estimated using the LFP calculated via the kernel method and the effects of medium-inhomogeneities are incorporated. We provide an example of the application of our method for the calculation of LFP and MEG under slow-waves of neuronal activity generated by a mean-field model of a network of Adaptive-Exponential Integrate-and-Fire (AdEx) neurons. We validate our method via comparison with results obtained from the corresponding spiking neuronal networks. Finally we provide an example of our method for whole brain simulations performed with The Virtual Brain (TVB), a recently developed tool for large scale simulations of the brain. Our method provides an efficient way of calculating electric and magnetic fields from mean-field models. This method exhibits a great potential for its application in large-scale or whole-brain simulations, where calculations via detailed biological models are not feasible. |
format | Online Article Text |
id | pubmed-9606720 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96067202022-10-28 Mean-field based framework for forward modeling of LFP and MEG signals Tesler, Federico Tort-Colet, Núria Depannemaecker, Damien Carlu, Mallory Destexhe, Alain Front Comput Neurosci Neuroscience The use of mean-field models to describe the activity of large neuronal populations has become a very powerful tool for large-scale or whole brain simulations. However, the calculation of brain signals from mean-field models, such as the electric and magnetic fields, is still under development. Thus, the emergence of new methods for an accurate and efficient calculation of such brain signals is currently of great relevance. In this paper we propose a novel method to calculate the local field potentials (LFP) and magnetic fields from mean-field models. The calculation of LFP is done via a kernel method based on unitary LFP's (the LFP generated by a single axon) that was recently introduced for spiking-networks simulations and that we adapt here for mean-field models. The calculation of the magnetic field is based on current-dipole and volume-conductor models, where the secondary currents (due to the conducting extracellular medium) are estimated using the LFP calculated via the kernel method and the effects of medium-inhomogeneities are incorporated. We provide an example of the application of our method for the calculation of LFP and MEG under slow-waves of neuronal activity generated by a mean-field model of a network of Adaptive-Exponential Integrate-and-Fire (AdEx) neurons. We validate our method via comparison with results obtained from the corresponding spiking neuronal networks. Finally we provide an example of our method for whole brain simulations performed with The Virtual Brain (TVB), a recently developed tool for large scale simulations of the brain. Our method provides an efficient way of calculating electric and magnetic fields from mean-field models. This method exhibits a great potential for its application in large-scale or whole-brain simulations, where calculations via detailed biological models are not feasible. Frontiers Media S.A. 2022-10-13 /pmc/articles/PMC9606720/ /pubmed/36313811 http://dx.doi.org/10.3389/fncom.2022.968278 Text en Copyright © 2022 Tesler, Tort-Colet, Depannemaecker, Carlu and Destexhe. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Tesler, Federico Tort-Colet, Núria Depannemaecker, Damien Carlu, Mallory Destexhe, Alain Mean-field based framework for forward modeling of LFP and MEG signals |
title | Mean-field based framework for forward modeling of LFP and MEG signals |
title_full | Mean-field based framework for forward modeling of LFP and MEG signals |
title_fullStr | Mean-field based framework for forward modeling of LFP and MEG signals |
title_full_unstemmed | Mean-field based framework for forward modeling of LFP and MEG signals |
title_short | Mean-field based framework for forward modeling of LFP and MEG signals |
title_sort | mean-field based framework for forward modeling of lfp and meg signals |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606720/ https://www.ncbi.nlm.nih.gov/pubmed/36313811 http://dx.doi.org/10.3389/fncom.2022.968278 |
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