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Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors

BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, Str...

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Autores principales: Qiao, Han, Yin, Hong, Feng, Yan, Tang, Huaping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606721/
https://www.ncbi.nlm.nih.gov/pubmed/36311703
http://dx.doi.org/10.3389/fimmu.2022.1008778
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author Qiao, Han
Yin, Hong
Feng, Yan
Tang, Huaping
author_facet Qiao, Han
Yin, Hong
Feng, Yan
Tang, Huaping
author_sort Qiao, Han
collection PubMed
description BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, String, cBioPortal, TISIDB, TCIA and TIMER database methods, we investigated the expression of RCSD1 in human tumors and its relationship to clinical prognosis, functional analysis of co-expression networks, mutation status, and immune infiltration in cancers, especially lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC). RESULTS: The expression of RCSD1 is low in most tumors compared with normal tissues, and its high expression is associated with good patient survival. The RCSD1 co-expression network is mainly involved in the regulation of immune response. In human cancer, RCSD1 plays an important role in the tumor microenvironment (TME) and is significantly associated with the expression of immune infiltrating cells (TIL) in lung cancer. CONCLUSIONS: As a prognostic biomarker of generalized cancer, RCSD1 is associated with immune infiltration.
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spelling pubmed-96067212022-10-28 Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors Qiao, Han Yin, Hong Feng, Yan Tang, Huaping Front Immunol Immunology BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, String, cBioPortal, TISIDB, TCIA and TIMER database methods, we investigated the expression of RCSD1 in human tumors and its relationship to clinical prognosis, functional analysis of co-expression networks, mutation status, and immune infiltration in cancers, especially lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC). RESULTS: The expression of RCSD1 is low in most tumors compared with normal tissues, and its high expression is associated with good patient survival. The RCSD1 co-expression network is mainly involved in the regulation of immune response. In human cancer, RCSD1 plays an important role in the tumor microenvironment (TME) and is significantly associated with the expression of immune infiltrating cells (TIL) in lung cancer. CONCLUSIONS: As a prognostic biomarker of generalized cancer, RCSD1 is associated with immune infiltration. Frontiers Media S.A. 2022-10-13 /pmc/articles/PMC9606721/ /pubmed/36311703 http://dx.doi.org/10.3389/fimmu.2022.1008778 Text en Copyright © 2022 Qiao, Yin, Feng and Tang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Qiao, Han
Yin, Hong
Feng, Yan
Tang, Huaping
Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title_full Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title_fullStr Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title_full_unstemmed Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title_short Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
title_sort pan-cancer analysis reveals the relationship between rcsd1 immune infiltration and clinical prognosis in human tumors
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606721/
https://www.ncbi.nlm.nih.gov/pubmed/36311703
http://dx.doi.org/10.3389/fimmu.2022.1008778
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