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Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors
BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, Str...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606721/ https://www.ncbi.nlm.nih.gov/pubmed/36311703 http://dx.doi.org/10.3389/fimmu.2022.1008778 |
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author | Qiao, Han Yin, Hong Feng, Yan Tang, Huaping |
author_facet | Qiao, Han Yin, Hong Feng, Yan Tang, Huaping |
author_sort | Qiao, Han |
collection | PubMed |
description | BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, String, cBioPortal, TISIDB, TCIA and TIMER database methods, we investigated the expression of RCSD1 in human tumors and its relationship to clinical prognosis, functional analysis of co-expression networks, mutation status, and immune infiltration in cancers, especially lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC). RESULTS: The expression of RCSD1 is low in most tumors compared with normal tissues, and its high expression is associated with good patient survival. The RCSD1 co-expression network is mainly involved in the regulation of immune response. In human cancer, RCSD1 plays an important role in the tumor microenvironment (TME) and is significantly associated with the expression of immune infiltrating cells (TIL) in lung cancer. CONCLUSIONS: As a prognostic biomarker of generalized cancer, RCSD1 is associated with immune infiltration. |
format | Online Article Text |
id | pubmed-9606721 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96067212022-10-28 Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors Qiao, Han Yin, Hong Feng, Yan Tang, Huaping Front Immunol Immunology BACKGROUND: RCSD1 is a cytoskeletal regulator that has been confirmed to undergo genetic mutations in hematological tumors, but the mechanisms of RCSD1 in pan-cancer and its impact on patient prognosis have not been studied. METHODS: Using TCGA, GEPIA, UALCAN, Kaplan-Meier plotters, Linkedomics, String, cBioPortal, TISIDB, TCIA and TIMER database methods, we investigated the expression of RCSD1 in human tumors and its relationship to clinical prognosis, functional analysis of co-expression networks, mutation status, and immune infiltration in cancers, especially lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC). RESULTS: The expression of RCSD1 is low in most tumors compared with normal tissues, and its high expression is associated with good patient survival. The RCSD1 co-expression network is mainly involved in the regulation of immune response. In human cancer, RCSD1 plays an important role in the tumor microenvironment (TME) and is significantly associated with the expression of immune infiltrating cells (TIL) in lung cancer. CONCLUSIONS: As a prognostic biomarker of generalized cancer, RCSD1 is associated with immune infiltration. Frontiers Media S.A. 2022-10-13 /pmc/articles/PMC9606721/ /pubmed/36311703 http://dx.doi.org/10.3389/fimmu.2022.1008778 Text en Copyright © 2022 Qiao, Yin, Feng and Tang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Qiao, Han Yin, Hong Feng, Yan Tang, Huaping Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title | Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title_full | Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title_fullStr | Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title_full_unstemmed | Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title_short | Pan-cancer analysis reveals the relationship between RCSD1 immune infiltration and clinical prognosis in human tumors |
title_sort | pan-cancer analysis reveals the relationship between rcsd1 immune infiltration and clinical prognosis in human tumors |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9606721/ https://www.ncbi.nlm.nih.gov/pubmed/36311703 http://dx.doi.org/10.3389/fimmu.2022.1008778 |
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