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Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms
The excessive proliferation of cyanobacteria in surface waters is a widespread problem worldwide, leading to the contamination of drinking water sources. Short- and long-term solutions for managing cyanobacterial blooms are needed for drinking water supplies. The goal of this research was to investi...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9607033/ https://www.ncbi.nlm.nih.gov/pubmed/36287957 http://dx.doi.org/10.3390/toxins14100688 |
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author | Le, Kim Thien Nguyen Maldonado, Juan Francisco Guerra Goitom, Eyerusalem Trigui, Hana Terrat, Yves Nguyen, Thanh-Luan Husk, Barry Shapiro, B. Jesse Sauvé, Sébastien Prévost, Michèle Dorner, Sarah |
author_facet | Le, Kim Thien Nguyen Maldonado, Juan Francisco Guerra Goitom, Eyerusalem Trigui, Hana Terrat, Yves Nguyen, Thanh-Luan Husk, Barry Shapiro, B. Jesse Sauvé, Sébastien Prévost, Michèle Dorner, Sarah |
author_sort | Le, Kim Thien Nguyen |
collection | PubMed |
description | The excessive proliferation of cyanobacteria in surface waters is a widespread problem worldwide, leading to the contamination of drinking water sources. Short- and long-term solutions for managing cyanobacterial blooms are needed for drinking water supplies. The goal of this research was to investigate the cyanobacteria community composition using shotgun metagenomics in a short term, in situ mesocosm experiment of two lakes following their coagulation with ferric sulfate (Fe(2)(SO(4))(3)) as an option for source water treatment. Among the nutrient paramenters, dissolved nitrogen was related to Microcystis in both Missisquoi Bay and Petit Lac St. François, while the presence of Synechococcus was related to total nitrogen, dissolved nitrogen, dissolved organic carbon, and dissolved phosphorus. Results from the shotgun metagenomic sequencing showed that Dolichospermum and Microcystis were the dominant genera in all of the mesocosms in the beginning of the sampling period in Missisquoi Bay and Petit Lac St. François, respectively. Potentially toxigenic genera such as Microcystis were correlated with intracellular microcystin concentrations. A principal component analysis showed that there was a change of the cyanobacterial composition at the genus level in the mesocosms after two days, which varied across the studied sites and sampling time. The cyanobacterial community richness and diversity did not change significantly after its coagulation by Fe(2)(SO(4))(3) in all of the mesocosms at either site. The use of Fe(2)(SO(4))(3) for an onsite source water treatment should consider its impact on cyanobacterial community structure and the reduction of toxin concentrations. |
format | Online Article Text |
id | pubmed-9607033 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96070332022-10-28 Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms Le, Kim Thien Nguyen Maldonado, Juan Francisco Guerra Goitom, Eyerusalem Trigui, Hana Terrat, Yves Nguyen, Thanh-Luan Husk, Barry Shapiro, B. Jesse Sauvé, Sébastien Prévost, Michèle Dorner, Sarah Toxins (Basel) Article The excessive proliferation of cyanobacteria in surface waters is a widespread problem worldwide, leading to the contamination of drinking water sources. Short- and long-term solutions for managing cyanobacterial blooms are needed for drinking water supplies. The goal of this research was to investigate the cyanobacteria community composition using shotgun metagenomics in a short term, in situ mesocosm experiment of two lakes following their coagulation with ferric sulfate (Fe(2)(SO(4))(3)) as an option for source water treatment. Among the nutrient paramenters, dissolved nitrogen was related to Microcystis in both Missisquoi Bay and Petit Lac St. François, while the presence of Synechococcus was related to total nitrogen, dissolved nitrogen, dissolved organic carbon, and dissolved phosphorus. Results from the shotgun metagenomic sequencing showed that Dolichospermum and Microcystis were the dominant genera in all of the mesocosms in the beginning of the sampling period in Missisquoi Bay and Petit Lac St. François, respectively. Potentially toxigenic genera such as Microcystis were correlated with intracellular microcystin concentrations. A principal component analysis showed that there was a change of the cyanobacterial composition at the genus level in the mesocosms after two days, which varied across the studied sites and sampling time. The cyanobacterial community richness and diversity did not change significantly after its coagulation by Fe(2)(SO(4))(3) in all of the mesocosms at either site. The use of Fe(2)(SO(4))(3) for an onsite source water treatment should consider its impact on cyanobacterial community structure and the reduction of toxin concentrations. MDPI 2022-10-07 /pmc/articles/PMC9607033/ /pubmed/36287957 http://dx.doi.org/10.3390/toxins14100688 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Le, Kim Thien Nguyen Maldonado, Juan Francisco Guerra Goitom, Eyerusalem Trigui, Hana Terrat, Yves Nguyen, Thanh-Luan Husk, Barry Shapiro, B. Jesse Sauvé, Sébastien Prévost, Michèle Dorner, Sarah Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title | Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title_full | Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title_fullStr | Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title_full_unstemmed | Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title_short | Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
title_sort | shotgun metagenomic sequencing to assess cyanobacterial community composition following coagulation of cyanobacterial blooms |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9607033/ https://www.ncbi.nlm.nih.gov/pubmed/36287957 http://dx.doi.org/10.3390/toxins14100688 |
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