Cargando…

Flnc: Machine Learning Improves the Identification of Novel Long Noncoding RNAs from Stand-Alone RNA-Seq Data

Long noncoding RNAs (lncRNAs) play critical regulatory roles in human development and disease. Although there are over 100,000 samples with available RNA sequencing (RNA-seq) data, many lncRNAs have yet to be annotated. The conventional approach to identifying novel lncRNAs from RNA-seq data is to f...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Zixiu, Zhou, Peng, Kwon, Euijin, Fitzgerald, Katherine A., Weng, Zhiping, Zhou, Chan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9607125/ https://www.ncbi.nlm.nih.gov/pubmed/36287122 http://dx.doi.org/10.3390/ncrna8050070

Ejemplares similares

FLNC Gene Splice Mutations Cause Dilated Cardiomyopathy
por: Begay, Rene L., et al.
Publicado: (2016)

A mutation update for the FLNC gene in myopathies and cardiomyopathies
por: Verdonschot, Job A. J., et al.
Publicado: (2020)

FLNC Expression Level Influences the Activity of TEAD-YAP/TAZ Signaling
por: Knyazeva, Anastasia, et al.
Publicado: (2020)

FLNC-Associated Myofibrillar Myopathy: New Clinical, Functional, and Proteomic Data
por: Kley, Rudolf Andre, et al.
Publicado: (2021)

Mutation profile of FLNC gene and its prognostic relevance in patients with hypertrophic cardiomyopathy
por: Cui, Hao, et al.
Publicado: (2018)

Cardiovascular Involvement in Pediatric FLNC Variants: A Case Series of Fourteen Patients
por: Baban, Anwar, et al.
Publicado: (2022)

Combined RNA-seq and RAT-seq mapping of long noncoding RNAs in pluripotent reprogramming
por: Du, Zhonghua, et al.
Publicado: (2018)

A novel FLNC frameshift and an OBSCN variant in a family with distal muscular dystrophy
por: Rossi, Daniela, et al.
Publicado: (2017)

Quantitative proteomics reveals FLNC as a potential progression marker for the development of hepatocellular carcinoma
por: Qi, Yingzi, et al.
Publicado: (2016)

HSPB7 interacts with dimerized FLNC and its absence results in progressive myopathy in skeletal muscles
por: Juo, Liang-Yi, et al.
Publicado: (2016)

Cardiomyopathy, Proximal Myopathy, Camptocormia, and Novel Filamin C (FLNC) Variant: A Case Report
por: Hooshmand, Sara Jasmin, et al.
Publicado: (2021)

RNA-seq-based genome annotation and identification of long-noncoding RNAs in the grapevine cultivar ‘Riesling’
por: Harris, Zachary N., et al.
Publicado: (2017)

Deep annotation of long noncoding RNAs by assembling RNA-seq and small RNA-seq data
por: Zhang, Jiaming, et al.
Publicado: (2023)

Identification of long noncoding RNAs involved in muscle differentiation
por: Lim, Yeong-Hwan, et al.
Publicado: (2018)

Enrichment of putatively damaging rare variants in the DYX2 locus and the reading-related genes CCDC136 and FLNC
por: Adams, Andrew K., et al.
Publicado: (2017)

Case Report: A Chinese Family of Hypertrophic Cardiomyopathy Caused by a Novel Splicing Mutation in the FLNC Gene
por: Huang, Chunhui, et al.
Publicado: (2022)

Drosophila CRISPR/Cas9 mutants as tools to analyse cardiac filamin function and pathogenicity of human FLNC variants
por: Ader, Flavie, et al.
Publicado: (2022)

Identification of differentially expressed long noncoding RNAs in the ovarian tissue of Shal and Sangsari ewes using RNA‐seq
por: Hosseinzadeh, Shahram, et al.
Publicado: (2022)

RNA-seq analysis of the key long noncoding RNAs and mRNAs related to cognitive impairment after cardiac arrest and cardiopulmonary resuscitation
por: Chen, Chan, et al.
Publicado: (2020)

Noncoding RNAs in apoptosis: identification and function
por: TÜNCEL, Özge, et al.
Publicado: (2021)

Audit for Stand Alone Systems
por: Ferguson, J
Publicado: (1986)

Oxytocin does not stand alone
por: Putnam, Philip T., et al.
Publicado: (2022)

RNA-Seq Analysis of the Key Long Noncoding RNAs and mRNAs Related to the Regulation of Acute Heat Stress in Rainbow Trout
por: Zhou, Chang-Qing, et al.
Publicado: (2022)

RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis
por: La Ferlita, Alessandro, et al.
Publicado: (2021)

Identification of expressed and conserved human noncoding RNAs
por: Nielsen, Morten Muhlig, et al.
Publicado: (2014)

Predicting the Functions of Long Noncoding RNAs Using RNA-Seq Based on Bayesian Network
por: Xiao, Yun, et al.
Publicado: (2015)

Systematic Identification and Molecular Characteristics of Long Noncoding RNAs in Pig Tissues
por: Yang, Yalan, et al.
Publicado: (2017)

Beyond genome-wide association studies: Investigating the role of noncoding regulatory elements in primary sclerosing cholangitis
por: Pratt, Henry E., et al.
Publicado: (2023)

Genome-Wide Identification and Characterization of Long Noncoding RNAs in Populus × canescens Roots Treated With Different Nitrogen Fertilizers
por: Zhou, Jing, et al.
Publicado: (2022)

Update on the role of noncoding RNAs in vitiligo
por: Zhou, Ting, et al.
Publicado: (2022)

Noncoding RNAs
por: Hardikar, Anandwardhan A., et al.
Publicado: (2012)

Identification of novel noncoding transcripts in telomerase-negative yeast using RNA-seq
por: Niederer, Rachel O., et al.
Publicado: (2016)

Comprehensive identification of long noncoding RNAs in colorectal cancer
por: James de Bony, Eric, et al.
Publicado: (2018)

Identification and characterization of functional long noncoding RNAs in cancer
por: Olivero, Christiane E., et al.
Publicado: (2020)

Automated Design of Diverse Stand-Alone Riboswitches
por: Wu, Michelle J., et al.
Publicado: (2019)

Genome-wide identification of DNA-PKcs-associated RNAs by RIP-Seq
por: Song, Zhiquan, et al.
Publicado: (2019)

Systematic identification and characterization of Aedes aegypti long noncoding RNAs (lncRNAs)
por: Azlan, Azali, et al.
Publicado: (2019)

RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction
por: Ramos, Thaís A.R., et al.
Publicado: (2021)

Comprehensive Analysis of Subtypes and Identification of Key lncRNAs Based on Glutamine Metabolism-Related Long Noncoding RNAs
por: Feng, Yuwei, et al.
Publicado: (2022)

Decoding Noncoding RNAs: Role of MicroRNAs and Long Noncoding RNAs in Ocular Neovascularization
por: Zhang, Yan, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_q5iik3p1b3rt90dl6cilbfljqq