Cargando…

Quick and wide-range taxonomical repertoire establishment of the cystic fibrosis lung microbiota by tandem mass spectrometry on sputum samples

Microorganisms proteotyping by tandem mass spectrometry has been recently shown as a powerful methodology to identify the wide-range taxonomy and biomass of microbiota. Sputum is the recommended specimen for routine microbiological monitoring of Cystic Fibrosis (CF) patients but has been rarely subm...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hardouin, Pauline, Pible, Olivier, Marchandin, Hélène, Culotta, Karen, Armengaud, Jean, Chiron, Raphaël, Grenga, Lucia
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2022
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9608366/ https://www.ncbi.nlm.nih.gov/pubmed/36312921 http://dx.doi.org/10.3389/fmicb.2022.975883

Ejemplares similares

Metaproteomics to Decipher CF Host-Microbiota Interactions: Overview, Challenges and Future Perspectives
por: Hardouin, Pauline, et al.
Publicado: (2021)

Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry
por: Hayoun, Karim, et al.
Publicado: (2019)

Quick microbial molecular phenotyping by differential shotgun proteomics
por: Gouveia, Duarte, et al.
Publicado: (2020)

Shortlisting SARS‐CoV‐2 Peptides for Targeted Studies from Experimental Data‐Dependent Acquisition Tandem Mass Spectrometry Data
por: Gouveia, Duarte, et al.
Publicado: (2020)

Evaluation of the Limit of Detection of Bacteria by Tandem Mass Spectrometry Proteotyping and Phylopeptidomics
por: Mappa, Charlotte, et al.
Publicado: (2023)

Identification and Characterization of Marine Microorganisms by Tandem Mass Spectrometry Proteotyping
por: Lozano, Clément, et al.
Publicado: (2022)

Combining proteogenomics and metaproteomics for deep taxonomic and functional characterization of microbiomes from a non-sequenced host
por: Gouveia, Duarte, et al.
Publicado: (2020)

Mix24X, a Lab-Assembled Reference to Evaluate Interpretation Procedures for Tandem Mass Spectrometry Proteotyping of Complex Samples
por: Mappa, Charlotte, et al.
Publicado: (2023)

Taxonomical and functional changes in COVID‐19 faecal microbiome could be related to SARS‐CoV‐2 faecal load
por: Grenga, Lucia, et al.
Publicado: (2022)

Taxonomical composition and functional analysis of biofilms sampled from a nuclear storage pool
por: Pible, Olivier, et al.
Publicado: (2023)

Estimating relative biomasses of organisms in microbiota using “phylopeptidomics”
por: Pible, Olivier, et al.
Publicado: (2020)

Increasing the power of interpretation for soil metaproteomics data
por: Jouffret, Virginie, et al.
Publicado: (2021)

Highly Diversified Pandoraea pulmonicola Population during Chronic Colonization in Cystic Fibrosis
por: Dupont, Chloé, et al.
Publicado: (2017)

Achromobacter xylosoxidans and Stenotrophomonas maltophilia: Emerging Pathogens Well-Armed for Life in the Cystic Fibrosis Patients’ Lung
por: Menetrey, Quentin, et al.
Publicado: (2021)

Biofilm Formation by Staphylococcus aureus in the Specific Context of Cystic Fibrosis
por: Jean-Pierre, Vincent, et al.
Publicado: (2022)

Proteotyping Environmental Microorganisms by Phylopeptidomics: Case Study Screening Water from a Radioactive Material Storage Pool
por: Hayoun, Karim, et al.
Publicado: (2020)

Biofilm Formation in Methicillin-Resistant Staphylococcus aureus Isolated in Cystic Fibrosis Patients Is Strain-Dependent and Differentially Influenced by Antibiotics
por: Boudet, Agathe, et al.
Publicado: (2021)

High Occurrence of Bacterial Competition Among Clinically Documented Opportunistic Pathogens Including Achromobacter xylosoxidans in Cystic Fibrosis
por: Menetrey, Quentin, et al.
Publicado: (2020)

Advances toward the Elucidation of Hypertonic Saline Effects on Pseudomonas aeruginosa from Cystic Fibrosis Patients
por: Michon, Anne-Laure, et al.
Publicado: (2014)

De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups
por: Cogne, Yannick, et al.
Publicado: (2019)

Neutrophil count in sputum is associated with increased sputum glucose and sputum L-lactate in cystic fibrosis
por: Nielsen, Bibi Uhre, et al.
Publicado: (2020)

Azithromycin and the microbiota of cystic fibrosis sputum
por: Acosta, Nicole, et al.
Publicado: (2021)

In-Host Emergence of Linezolid Resistance in a Complex Pattern of Toxic Shock Syndrome Toxin-1-Positive Methicillin-Resistant Staphylococcus aureus Colonization in Siblings with Cystic Fibrosis
por: Boudet, Agathe, et al.
Publicado: (2021)

Quick change: post-transcriptional regulation in Pseudomonas
por: Grenga, Lucia, et al.
Publicado: (2017)

Application of Tandem Two-Dimensional Mass Spectrometry for Top-Down Deep Sequencing of Calmodulin
por: Floris, Federico, et al.
Publicado: (2018)

In-Depth Analysis of Exoproteomes from Marine Bacteria by Shotgun Liquid Chromatography-Tandem Mass Spectrometry: the Ruegeria pomeroyi DSS-3 Case-Study
por: Christie-Oleza, Joseph Alexander, et al.
Publicado: (2010)

Current cough and sputum assessed by the cough and sputum assessment-questionnaire (CASA-Q) is associated with quality of life impairment in cystic fibrosis
por: Charon, Lucie, et al.
Publicado: (2023)

Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines
por: Grenga, Lucia, et al.
Publicado: (2020)

Tandem Repeats in Bacillus: Unique Features and Taxonomic Distribution
por: Subirana, Juan A., et al.
Publicado: (2021)

Tandem Exon Duplications Expanding the Alternative Splicing Repertoire
por: Ivanov, T. M., et al.
Publicado: (2022)

Comparative Analysis of Clinical Parameters and Sputum Biomarkers in Establishing the Relevance of Filamentous Fungi in Cystic Fibrosis
por: Patel, Deepa, et al.
Publicado: (2021)

Expanding the taxonomic range in the fecal metagenome
por: Allnutt, Theo R., et al.
Publicado: (2021)

Establishment to measure oxycodone in plasma with liquid chromatography–tandem mass spectrometry
por: Ito, Suguru, et al.
Publicado: (2022)

Expanding the repertoire of human tandem repeat RNA-binding proteins
por: Ormazábal, Agustín, et al.
Publicado: (2023)

Sputum Active Polymyxin Lipopeptides: Activity against Cystic Fibrosis Pseudomonas aeruginosa Isolates and Their Interactions with Sputum Biomolecules
por: Schneider-Futschik, Elena K., et al.
Publicado: (2018)

The Inhibition of Superoxide Production by the Soluble Phase of Cystic Fibrosis Sputum
por: Dosanjh, Amrita
Publicado: (2008)

Sputum Biomarkers and the Prediction of Clinical Outcomes in Patients with Cystic Fibrosis
por: Liou, Theodore G., et al.
Publicado: (2012)

Isolation and characterization of microparticles in sputum from cystic fibrosis patients
por: Porro, Chiara, et al.
Publicado: (2010)

Reassessment of the importance of mucins in determining sputum properties in cystic fibrosis
por: Horsley, Alex, et al.
Publicado: (2014)

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome
por: Quinn, Robert A, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_n0j60mf9su1jrtqisrit4ff8r8