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Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research

Nuclear magnetic resonance (NMR) spectroscopy is one of the principal analytical techniques for metabolomics. It has the advantages of minimal sample preparation and high reproducibility, making it an ideal technique for generating large amounts of metabolomics data for biobanks and large-scale stud...

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Autores principales: Huang, Katherine, Thomas, Natalie, Gooley, Paul R., Armstrong, Christopher W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9609461/
https://www.ncbi.nlm.nih.gov/pubmed/36295865
http://dx.doi.org/10.3390/metabo12100963
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author Huang, Katherine
Thomas, Natalie
Gooley, Paul R.
Armstrong, Christopher W.
author_facet Huang, Katherine
Thomas, Natalie
Gooley, Paul R.
Armstrong, Christopher W.
author_sort Huang, Katherine
collection PubMed
description Nuclear magnetic resonance (NMR) spectroscopy is one of the principal analytical techniques for metabolomics. It has the advantages of minimal sample preparation and high reproducibility, making it an ideal technique for generating large amounts of metabolomics data for biobanks and large-scale studies. Metabolomics is a popular “omics” technology and has established itself as a comprehensive exploratory biomarker tool; however, it has yet to reach its collaborative potential in data collation due to the lack of standardisation of the metabolomics workflow seen across small-scale studies. This systematic review compiles the different NMR metabolomics methods used for serum, plasma, and urine studies, from sample collection to data analysis, that were most popularly employed over a two-year period in 2019 and 2020. It also outlines how these methods influence the raw data and the downstream interpretations, and the importance of reporting for reproducibility and result validation. This review can act as a valuable summary of NMR metabolomic workflows that are actively used in human biofluid research and will help guide the workflow choice for future research.
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spelling pubmed-96094612022-10-28 Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research Huang, Katherine Thomas, Natalie Gooley, Paul R. Armstrong, Christopher W. Metabolites Systematic Review Nuclear magnetic resonance (NMR) spectroscopy is one of the principal analytical techniques for metabolomics. It has the advantages of minimal sample preparation and high reproducibility, making it an ideal technique for generating large amounts of metabolomics data for biobanks and large-scale studies. Metabolomics is a popular “omics” technology and has established itself as a comprehensive exploratory biomarker tool; however, it has yet to reach its collaborative potential in data collation due to the lack of standardisation of the metabolomics workflow seen across small-scale studies. This systematic review compiles the different NMR metabolomics methods used for serum, plasma, and urine studies, from sample collection to data analysis, that were most popularly employed over a two-year period in 2019 and 2020. It also outlines how these methods influence the raw data and the downstream interpretations, and the importance of reporting for reproducibility and result validation. This review can act as a valuable summary of NMR metabolomic workflows that are actively used in human biofluid research and will help guide the workflow choice for future research. MDPI 2022-10-12 /pmc/articles/PMC9609461/ /pubmed/36295865 http://dx.doi.org/10.3390/metabo12100963 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Systematic Review
Huang, Katherine
Thomas, Natalie
Gooley, Paul R.
Armstrong, Christopher W.
Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title_full Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title_fullStr Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title_full_unstemmed Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title_short Systematic Review of NMR-Based Metabolomics Practices in Human Disease Research
title_sort systematic review of nmr-based metabolomics practices in human disease research
topic Systematic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9609461/
https://www.ncbi.nlm.nih.gov/pubmed/36295865
http://dx.doi.org/10.3390/metabo12100963
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