Intrahost SARS-CoV-2 k-mer Identification Method (iSKIM) for Rapid Detection of Mutations of Concern Reveals Emergence of Global Mutation Patterns

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Despite unprecedented global sequencing and surveillance of SARS-CoV-2, timely identification of the emergence and spread of novel variants of concern (VoCs) remains a challenge. Several million raw genome sequencing runs are now publicly available. We sought to survey these datasets for intrahost v...

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Detalles Bibliográficos
Autores principales: Thommana, Ashley, Shakya, Migun, Gandhi, Jaykumar, Fung, Christian K., Chain, Patrick S. G., Maljkovic Berry, Irina, Conte, Matthew A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9609618/
https://www.ncbi.nlm.nih.gov/pubmed/36298683
http://dx.doi.org/10.3390/v14102128
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