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Benchmarking emergency department prediction models with machine learning and public electronic health records

The demand for emergency department (ED) services is increasing across the globe, particularly during the current COVID-19 pandemic. Clinical triage and risk assessment have become increasingly challenging due to the shortage of medical resources and the strain on hospital infrastructure caused by t...

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Autores principales: Xie, Feng, Zhou, Jun, Lee, Jin Wee, Tan, Mingrui, Li, Siqi, Rajnthern, Logasan S/O, Chee, Marcel Lucas, Chakraborty, Bibhas, Wong, An-Kwok Ian, Dagan, Alon, Ong, Marcus Eng Hock, Gao, Fei, Liu, Nan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9610299/
https://www.ncbi.nlm.nih.gov/pubmed/36302776
http://dx.doi.org/10.1038/s41597-022-01782-9
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author Xie, Feng
Zhou, Jun
Lee, Jin Wee
Tan, Mingrui
Li, Siqi
Rajnthern, Logasan S/O
Chee, Marcel Lucas
Chakraborty, Bibhas
Wong, An-Kwok Ian
Dagan, Alon
Ong, Marcus Eng Hock
Gao, Fei
Liu, Nan
author_facet Xie, Feng
Zhou, Jun
Lee, Jin Wee
Tan, Mingrui
Li, Siqi
Rajnthern, Logasan S/O
Chee, Marcel Lucas
Chakraborty, Bibhas
Wong, An-Kwok Ian
Dagan, Alon
Ong, Marcus Eng Hock
Gao, Fei
Liu, Nan
author_sort Xie, Feng
collection PubMed
description The demand for emergency department (ED) services is increasing across the globe, particularly during the current COVID-19 pandemic. Clinical triage and risk assessment have become increasingly challenging due to the shortage of medical resources and the strain on hospital infrastructure caused by the pandemic. As a result of the widespread use of electronic health records (EHRs), we now have access to a vast amount of clinical data, which allows us to develop prediction models and decision support systems to address these challenges. To date, there is no widely accepted clinical prediction benchmark related to the ED based on large-scale public EHRs. An open-source benchmark data platform would streamline research workflows by eliminating cumbersome data preprocessing, and facilitate comparisons among different studies and methodologies. Based on the Medical Information Mart for Intensive Care IV Emergency Department (MIMIC-IV-ED) database, we created a benchmark dataset and proposed three clinical prediction benchmarks. This study provides future researchers with insights, suggestions, and protocols for managing data and developing predictive tools for emergency care.
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spelling pubmed-96102992022-10-28 Benchmarking emergency department prediction models with machine learning and public electronic health records Xie, Feng Zhou, Jun Lee, Jin Wee Tan, Mingrui Li, Siqi Rajnthern, Logasan S/O Chee, Marcel Lucas Chakraborty, Bibhas Wong, An-Kwok Ian Dagan, Alon Ong, Marcus Eng Hock Gao, Fei Liu, Nan Sci Data Analysis The demand for emergency department (ED) services is increasing across the globe, particularly during the current COVID-19 pandemic. Clinical triage and risk assessment have become increasingly challenging due to the shortage of medical resources and the strain on hospital infrastructure caused by the pandemic. As a result of the widespread use of electronic health records (EHRs), we now have access to a vast amount of clinical data, which allows us to develop prediction models and decision support systems to address these challenges. To date, there is no widely accepted clinical prediction benchmark related to the ED based on large-scale public EHRs. An open-source benchmark data platform would streamline research workflows by eliminating cumbersome data preprocessing, and facilitate comparisons among different studies and methodologies. Based on the Medical Information Mart for Intensive Care IV Emergency Department (MIMIC-IV-ED) database, we created a benchmark dataset and proposed three clinical prediction benchmarks. This study provides future researchers with insights, suggestions, and protocols for managing data and developing predictive tools for emergency care. Nature Publishing Group UK 2022-10-27 /pmc/articles/PMC9610299/ /pubmed/36302776 http://dx.doi.org/10.1038/s41597-022-01782-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Analysis
Xie, Feng
Zhou, Jun
Lee, Jin Wee
Tan, Mingrui
Li, Siqi
Rajnthern, Logasan S/O
Chee, Marcel Lucas
Chakraborty, Bibhas
Wong, An-Kwok Ian
Dagan, Alon
Ong, Marcus Eng Hock
Gao, Fei
Liu, Nan
Benchmarking emergency department prediction models with machine learning and public electronic health records
title Benchmarking emergency department prediction models with machine learning and public electronic health records
title_full Benchmarking emergency department prediction models with machine learning and public electronic health records
title_fullStr Benchmarking emergency department prediction models with machine learning and public electronic health records
title_full_unstemmed Benchmarking emergency department prediction models with machine learning and public electronic health records
title_short Benchmarking emergency department prediction models with machine learning and public electronic health records
title_sort benchmarking emergency department prediction models with machine learning and public electronic health records
topic Analysis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9610299/
https://www.ncbi.nlm.nih.gov/pubmed/36302776
http://dx.doi.org/10.1038/s41597-022-01782-9
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