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A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography

In recent years, it has become increasingly popular to solve inverse problems of various tomography methods with deep learning techniques. Here, a deep residual neural network (ResNet) is introduced to reconstruct the conductivity distribution of a biomedical, voluminous body in magnetic induction t...

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Autores principales: Hofmann, Anna, Klein, Martin, Rueter, Dirk, Sauer, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9610508/
https://www.ncbi.nlm.nih.gov/pubmed/36298274
http://dx.doi.org/10.3390/s22207925
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author Hofmann, Anna
Klein, Martin
Rueter, Dirk
Sauer, Andreas
author_facet Hofmann, Anna
Klein, Martin
Rueter, Dirk
Sauer, Andreas
author_sort Hofmann, Anna
collection PubMed
description In recent years, it has become increasingly popular to solve inverse problems of various tomography methods with deep learning techniques. Here, a deep residual neural network (ResNet) is introduced to reconstruct the conductivity distribution of a biomedical, voluminous body in magnetic induction tomography (MIT). MIT is a relatively new, contactless and noninvasive tomography method. However, the ill-conditioned inverse problem of MIT is challenging to solve, especially for voluminous bodies with conductivities in the range of biological tissue. The proposed ResNet can reconstruct up to two cuboid perturbation objects with conductivities of [Formula: see text] and [Formula: see text] S/m in the whole voluminous body, even in the difficult-to-detect centre. The dataset used for training and testing contained simulated signals of cuboid perturbation objects with randomised lengths and positions. Furthermore, special care went into avoiding the inverse crime while creating the dataset. The calculated metrics showed good results over the test dataset, with an average correlation coefficient of [Formula: see text] and mean squared error of [Formula: see text]. Robustness was tested on three special test cases containing unknown shapes, conductivities and a real measurement that showed error results well within the margin of the metrics of the test dataset. This indicates that a good approximation of the inverse function in MIT for up to two perturbation objects was achieved and the inverse crime was avoided.
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spelling pubmed-96105082022-10-28 A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography Hofmann, Anna Klein, Martin Rueter, Dirk Sauer, Andreas Sensors (Basel) Article In recent years, it has become increasingly popular to solve inverse problems of various tomography methods with deep learning techniques. Here, a deep residual neural network (ResNet) is introduced to reconstruct the conductivity distribution of a biomedical, voluminous body in magnetic induction tomography (MIT). MIT is a relatively new, contactless and noninvasive tomography method. However, the ill-conditioned inverse problem of MIT is challenging to solve, especially for voluminous bodies with conductivities in the range of biological tissue. The proposed ResNet can reconstruct up to two cuboid perturbation objects with conductivities of [Formula: see text] and [Formula: see text] S/m in the whole voluminous body, even in the difficult-to-detect centre. The dataset used for training and testing contained simulated signals of cuboid perturbation objects with randomised lengths and positions. Furthermore, special care went into avoiding the inverse crime while creating the dataset. The calculated metrics showed good results over the test dataset, with an average correlation coefficient of [Formula: see text] and mean squared error of [Formula: see text]. Robustness was tested on three special test cases containing unknown shapes, conductivities and a real measurement that showed error results well within the margin of the metrics of the test dataset. This indicates that a good approximation of the inverse function in MIT for up to two perturbation objects was achieved and the inverse crime was avoided. MDPI 2022-10-18 /pmc/articles/PMC9610508/ /pubmed/36298274 http://dx.doi.org/10.3390/s22207925 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hofmann, Anna
Klein, Martin
Rueter, Dirk
Sauer, Andreas
A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title_full A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title_fullStr A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title_full_unstemmed A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title_short A Deep Residual Neural Network for Image Reconstruction in Biomedical 3D Magnetic Induction Tomography
title_sort deep residual neural network for image reconstruction in biomedical 3d magnetic induction tomography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9610508/
https://www.ncbi.nlm.nih.gov/pubmed/36298274
http://dx.doi.org/10.3390/s22207925
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