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The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis

Cherry leaf roll virus (CLRV) is an important plant pathogen that causes severe and detrimental effects on cherry and other fruit plants. Despite recent progress in plant pathology, molecular biology, and population genetics of CLRV, the spatiotemporal spread of this virus remains poorly studied. In...

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Autores principales: Shen, Jianguo, Guo, Jing, Chen, Xihong, Cai, Wei, Du, Zhenguo, Zhang, Yongjiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9612246/
https://www.ncbi.nlm.nih.gov/pubmed/36298735
http://dx.doi.org/10.3390/v14102179
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author Shen, Jianguo
Guo, Jing
Chen, Xihong
Cai, Wei
Du, Zhenguo
Zhang, Yongjiang
author_facet Shen, Jianguo
Guo, Jing
Chen, Xihong
Cai, Wei
Du, Zhenguo
Zhang, Yongjiang
author_sort Shen, Jianguo
collection PubMed
description Cherry leaf roll virus (CLRV) is an important plant pathogen that causes severe and detrimental effects on cherry and other fruit plants. Despite recent progress in plant pathology, molecular biology, and population genetics of CLRV, the spatiotemporal spread of this virus remains poorly studied. In this study, we employed a Bayesian phylodynamics framework to investigate the spatial diffusion patterns of CLRV by analyzing the coat protein gene sequences of 81 viral isolates collected from five different countries. Consistent with the trade of cherry, our Bayesian phylodynamic analyses pointed to viral origins in New Zealand and identified multiple migration pathways between Germany and other countries, suggesting that Germany has played an important role in CLRV transmission. The results of our study will be useful in developing sustainable management strategies to control this pathogen.
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spelling pubmed-96122462022-10-28 The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis Shen, Jianguo Guo, Jing Chen, Xihong Cai, Wei Du, Zhenguo Zhang, Yongjiang Viruses Communication Cherry leaf roll virus (CLRV) is an important plant pathogen that causes severe and detrimental effects on cherry and other fruit plants. Despite recent progress in plant pathology, molecular biology, and population genetics of CLRV, the spatiotemporal spread of this virus remains poorly studied. In this study, we employed a Bayesian phylodynamics framework to investigate the spatial diffusion patterns of CLRV by analyzing the coat protein gene sequences of 81 viral isolates collected from five different countries. Consistent with the trade of cherry, our Bayesian phylodynamic analyses pointed to viral origins in New Zealand and identified multiple migration pathways between Germany and other countries, suggesting that Germany has played an important role in CLRV transmission. The results of our study will be useful in developing sustainable management strategies to control this pathogen. MDPI 2022-10-01 /pmc/articles/PMC9612246/ /pubmed/36298735 http://dx.doi.org/10.3390/v14102179 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Shen, Jianguo
Guo, Jing
Chen, Xihong
Cai, Wei
Du, Zhenguo
Zhang, Yongjiang
The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title_full The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title_fullStr The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title_full_unstemmed The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title_short The Spatial Diffusion of Cherry Leaf Roll Virus Revealed by a Bayesian Phylodynamic Analysis
title_sort spatial diffusion of cherry leaf roll virus revealed by a bayesian phylodynamic analysis
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9612246/
https://www.ncbi.nlm.nih.gov/pubmed/36298735
http://dx.doi.org/10.3390/v14102179
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