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A CNN-transformer fusion network for COVID-19 CXR image classification

The global health crisis due to the fast spread of coronavirus disease (Covid-19) has caused great danger to all aspects of healthcare, economy, and other aspects. The highly infectious and insidious nature of the new coronavirus greatly increases the difficulty of outbreak prevention and control. T...

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Autores principales: Cao, Kai, Deng, Tao, Zhang, Chuanlin, Lu, Limeng, Li, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9612494/
https://www.ncbi.nlm.nih.gov/pubmed/36301907
http://dx.doi.org/10.1371/journal.pone.0276758
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author Cao, Kai
Deng, Tao
Zhang, Chuanlin
Lu, Limeng
Li, Lin
author_facet Cao, Kai
Deng, Tao
Zhang, Chuanlin
Lu, Limeng
Li, Lin
author_sort Cao, Kai
collection PubMed
description The global health crisis due to the fast spread of coronavirus disease (Covid-19) has caused great danger to all aspects of healthcare, economy, and other aspects. The highly infectious and insidious nature of the new coronavirus greatly increases the difficulty of outbreak prevention and control. The early and rapid detection of Covid-19 is an effective way to reduce the spread of Covid-19. However, detecting Covid-19 accurately and quickly in large populations remains to be a major challenge worldwide. In this study, A CNN-transformer fusion framework is proposed for the automatic classification of pneumonia on chest X-ray. This framework includes two parts: data processing and image classification. The data processing stage is to eliminate the differences between data from different medical institutions so that they have the same storage format; in the image classification stage, we use a multi-branch network with a custom convolution module and a transformer module, including feature extraction, feature focus, and feature classification sub-networks. Feature extraction subnetworks extract the shallow features of the image and interact with the information through the convolution and transformer modules. Both the local and global features are extracted by the convolution module and transformer module of feature-focus subnetworks, and are classified by the feature classification subnetworks. The proposed network could decide whether or not a patient has pneumonia, and differentiate between Covid-19 and bacterial pneumonia. This network was implemented on the collected benchmark datasets and the result shows that accuracy, precision, recall, and F1 score are 97.09%, 97.16%, 96.93%, and 97.04%, respectively. Our network was compared with other researchers’ proposed methods and achieved better results in terms of accuracy, precision, and F1 score, proving that it is superior for Covid-19 detection. With further improvements to this network, we hope that it will provide doctors with an effective tool for diagnosing Covid-19.
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spelling pubmed-96124942022-10-28 A CNN-transformer fusion network for COVID-19 CXR image classification Cao, Kai Deng, Tao Zhang, Chuanlin Lu, Limeng Li, Lin PLoS One Research Article The global health crisis due to the fast spread of coronavirus disease (Covid-19) has caused great danger to all aspects of healthcare, economy, and other aspects. The highly infectious and insidious nature of the new coronavirus greatly increases the difficulty of outbreak prevention and control. The early and rapid detection of Covid-19 is an effective way to reduce the spread of Covid-19. However, detecting Covid-19 accurately and quickly in large populations remains to be a major challenge worldwide. In this study, A CNN-transformer fusion framework is proposed for the automatic classification of pneumonia on chest X-ray. This framework includes two parts: data processing and image classification. The data processing stage is to eliminate the differences between data from different medical institutions so that they have the same storage format; in the image classification stage, we use a multi-branch network with a custom convolution module and a transformer module, including feature extraction, feature focus, and feature classification sub-networks. Feature extraction subnetworks extract the shallow features of the image and interact with the information through the convolution and transformer modules. Both the local and global features are extracted by the convolution module and transformer module of feature-focus subnetworks, and are classified by the feature classification subnetworks. The proposed network could decide whether or not a patient has pneumonia, and differentiate between Covid-19 and bacterial pneumonia. This network was implemented on the collected benchmark datasets and the result shows that accuracy, precision, recall, and F1 score are 97.09%, 97.16%, 96.93%, and 97.04%, respectively. Our network was compared with other researchers’ proposed methods and achieved better results in terms of accuracy, precision, and F1 score, proving that it is superior for Covid-19 detection. With further improvements to this network, we hope that it will provide doctors with an effective tool for diagnosing Covid-19. Public Library of Science 2022-10-27 /pmc/articles/PMC9612494/ /pubmed/36301907 http://dx.doi.org/10.1371/journal.pone.0276758 Text en © 2022 Cao et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cao, Kai
Deng, Tao
Zhang, Chuanlin
Lu, Limeng
Li, Lin
A CNN-transformer fusion network for COVID-19 CXR image classification
title A CNN-transformer fusion network for COVID-19 CXR image classification
title_full A CNN-transformer fusion network for COVID-19 CXR image classification
title_fullStr A CNN-transformer fusion network for COVID-19 CXR image classification
title_full_unstemmed A CNN-transformer fusion network for COVID-19 CXR image classification
title_short A CNN-transformer fusion network for COVID-19 CXR image classification
title_sort cnn-transformer fusion network for covid-19 cxr image classification
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9612494/
https://www.ncbi.nlm.nih.gov/pubmed/36301907
http://dx.doi.org/10.1371/journal.pone.0276758
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