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Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach

Early ischemic lesion on non-contrast computed tomogram (NCCT) in acute stroke can be subtle and need confirmation with magnetic resonance (MR) image for treatment decision-making. We retrospectively included the NCCT slices of 129 normal subjects and 546 ischemic stroke patients (onset < 12 h) w...

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Autores principales: Sahoo, Prasan Kumar, Mohapatra, Sulagna, Wu, Ching-Yi, Huang, Kuo-Lun, Chang, Ting-Yu, Lee, Tsong-Hai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9613643/
https://www.ncbi.nlm.nih.gov/pubmed/36302876
http://dx.doi.org/10.1038/s41598-022-22939-x
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author Sahoo, Prasan Kumar
Mohapatra, Sulagna
Wu, Ching-Yi
Huang, Kuo-Lun
Chang, Ting-Yu
Lee, Tsong-Hai
author_facet Sahoo, Prasan Kumar
Mohapatra, Sulagna
Wu, Ching-Yi
Huang, Kuo-Lun
Chang, Ting-Yu
Lee, Tsong-Hai
author_sort Sahoo, Prasan Kumar
collection PubMed
description Early ischemic lesion on non-contrast computed tomogram (NCCT) in acute stroke can be subtle and need confirmation with magnetic resonance (MR) image for treatment decision-making. We retrospectively included the NCCT slices of 129 normal subjects and 546 ischemic stroke patients (onset < 12 h) with corresponding MR slices as reference standard from a prospective registry of Chang Gung Research Databank. In model selection, NCCT slices were preprocessed and fed into five different pre-trained convolutional neural network (CNN) models including Visual Geometry Group 16 (VGG16), Residual Networks 50, Inception-ResNet-v2, Inception-v3, and Inception-v4. In model derivation, the customized-VGG16 model could achieve an accuracy of 0.83, sensitivity 0.85, F-score 0.80, specificity 0.82, and AP 0.82 after using a tenfold cross-validation method, outperforming the pre-trained VGG16 model. In model evaluation, the customized-VGG16 model could correctly identify 53 in 58 subjects (91.37%) including 29 ischemic stroke patients and 24 normal subjects and reached the sensitivity of 86.95% in identifying ischemic NCCT slices (200/230), irrespective of supratentorial or infratentorial lesions. The customized-VGG16 CNN model can successfully identify the presence of early ischemic lesions on NCCT slices using the concept of automatic feature learning. Further study will be proceeded to detect the location of ischemic lesion.
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spelling pubmed-96136432022-10-29 Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach Sahoo, Prasan Kumar Mohapatra, Sulagna Wu, Ching-Yi Huang, Kuo-Lun Chang, Ting-Yu Lee, Tsong-Hai Sci Rep Article Early ischemic lesion on non-contrast computed tomogram (NCCT) in acute stroke can be subtle and need confirmation with magnetic resonance (MR) image for treatment decision-making. We retrospectively included the NCCT slices of 129 normal subjects and 546 ischemic stroke patients (onset < 12 h) with corresponding MR slices as reference standard from a prospective registry of Chang Gung Research Databank. In model selection, NCCT slices were preprocessed and fed into five different pre-trained convolutional neural network (CNN) models including Visual Geometry Group 16 (VGG16), Residual Networks 50, Inception-ResNet-v2, Inception-v3, and Inception-v4. In model derivation, the customized-VGG16 model could achieve an accuracy of 0.83, sensitivity 0.85, F-score 0.80, specificity 0.82, and AP 0.82 after using a tenfold cross-validation method, outperforming the pre-trained VGG16 model. In model evaluation, the customized-VGG16 model could correctly identify 53 in 58 subjects (91.37%) including 29 ischemic stroke patients and 24 normal subjects and reached the sensitivity of 86.95% in identifying ischemic NCCT slices (200/230), irrespective of supratentorial or infratentorial lesions. The customized-VGG16 CNN model can successfully identify the presence of early ischemic lesions on NCCT slices using the concept of automatic feature learning. Further study will be proceeded to detect the location of ischemic lesion. Nature Publishing Group UK 2022-10-27 /pmc/articles/PMC9613643/ /pubmed/36302876 http://dx.doi.org/10.1038/s41598-022-22939-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sahoo, Prasan Kumar
Mohapatra, Sulagna
Wu, Ching-Yi
Huang, Kuo-Lun
Chang, Ting-Yu
Lee, Tsong-Hai
Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title_full Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title_fullStr Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title_full_unstemmed Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title_short Automatic identification of early ischemic lesions on non-contrast CT with deep learning approach
title_sort automatic identification of early ischemic lesions on non-contrast ct with deep learning approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9613643/
https://www.ncbi.nlm.nih.gov/pubmed/36302876
http://dx.doi.org/10.1038/s41598-022-22939-x
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