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Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils

Nitrogen (N) is the first essential nutrient for tea growth. However, the effect of soil acidification on soil N cycle and N forms in tea plantation are unclear. In this study, the nitrogen contents, soil enzyme activity and N mineralization rate in acidified soil of tea plantation were measured. Mo...

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Autores principales: Lin, Shunxian, Liu, Zhijun, Wang, Yuchao, Li, Jiayu, Wang, Gege, Ye, Jianghua, Wang, Haibin, He, Haibin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9614370/
https://www.ncbi.nlm.nih.gov/pubmed/36311106
http://dx.doi.org/10.3389/fpls.2022.998178
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author Lin, Shunxian
Liu, Zhijun
Wang, Yuchao
Li, Jiayu
Wang, Gege
Ye, Jianghua
Wang, Haibin
He, Haibin
author_facet Lin, Shunxian
Liu, Zhijun
Wang, Yuchao
Li, Jiayu
Wang, Gege
Ye, Jianghua
Wang, Haibin
He, Haibin
author_sort Lin, Shunxian
collection PubMed
description Nitrogen (N) is the first essential nutrient for tea growth. However, the effect of soil acidification on soil N cycle and N forms in tea plantation are unclear. In this study, the nitrogen contents, soil enzyme activity and N mineralization rate in acidified soil of tea plantation were measured. Moreover, the effects of soil acidification on N cycling functional genes and functional microorganisms were explored by soil metagenomics. The results showed that the NH(4) (+)-N, available N and net N mineralization rate in the acidified tea soil decreased significantly, while the NO(3) (-)-N content increased significantly. The activities of sucrase, protease, catalase and polyphenol oxidase in the acidified tea soil decreased significantly. The abundance of genes related to ammonification, dissimilatory N reduction, nitrification and denitrification pathway in the acidified tea soil increased significantly, but the abundance of functional genes related to glutamate synthesis and assimilatory N reduction pathway were opposite. In addition, the abundance of Proteobacteria, Actinobacteria, Chloroflexi, Nitrospirae, Actinomadura, Nitrospira etc. microorganisms related to nitrification, denitrification and pathogenic effect increased significantly in the acidified tea soil. The correlation results showed that soil pH and N forms were correlated with soil enzyme activity, N cycling function genes and microbial changes. In conclusion, soil acidification results in significant changes in enzyme activity, gene abundance and microorganism involved in various N cycle processes in acidified tea soil, which leads to imbalance of soil N form ratio and is not conducive to N transformation and absorption of tea trees.
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spelling pubmed-96143702022-10-29 Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils Lin, Shunxian Liu, Zhijun Wang, Yuchao Li, Jiayu Wang, Gege Ye, Jianghua Wang, Haibin He, Haibin Front Plant Sci Plant Science Nitrogen (N) is the first essential nutrient for tea growth. However, the effect of soil acidification on soil N cycle and N forms in tea plantation are unclear. In this study, the nitrogen contents, soil enzyme activity and N mineralization rate in acidified soil of tea plantation were measured. Moreover, the effects of soil acidification on N cycling functional genes and functional microorganisms were explored by soil metagenomics. The results showed that the NH(4) (+)-N, available N and net N mineralization rate in the acidified tea soil decreased significantly, while the NO(3) (-)-N content increased significantly. The activities of sucrase, protease, catalase and polyphenol oxidase in the acidified tea soil decreased significantly. The abundance of genes related to ammonification, dissimilatory N reduction, nitrification and denitrification pathway in the acidified tea soil increased significantly, but the abundance of functional genes related to glutamate synthesis and assimilatory N reduction pathway were opposite. In addition, the abundance of Proteobacteria, Actinobacteria, Chloroflexi, Nitrospirae, Actinomadura, Nitrospira etc. microorganisms related to nitrification, denitrification and pathogenic effect increased significantly in the acidified tea soil. The correlation results showed that soil pH and N forms were correlated with soil enzyme activity, N cycling function genes and microbial changes. In conclusion, soil acidification results in significant changes in enzyme activity, gene abundance and microorganism involved in various N cycle processes in acidified tea soil, which leads to imbalance of soil N form ratio and is not conducive to N transformation and absorption of tea trees. Frontiers Media S.A. 2022-10-14 /pmc/articles/PMC9614370/ /pubmed/36311106 http://dx.doi.org/10.3389/fpls.2022.998178 Text en Copyright © 2022 Lin, Liu, Wang, Li, Wang, Ye, Wang and He https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Lin, Shunxian
Liu, Zhijun
Wang, Yuchao
Li, Jiayu
Wang, Gege
Ye, Jianghua
Wang, Haibin
He, Haibin
Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title_full Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title_fullStr Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title_full_unstemmed Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title_short Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
title_sort soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9614370/
https://www.ncbi.nlm.nih.gov/pubmed/36311106
http://dx.doi.org/10.3389/fpls.2022.998178
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