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Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models

Leptospirosis, the infectious disease caused by a spirochete bacteria, is a major public health problem worldwide. In Argentina, some regions have climatic and geographical characteristics that favor the habitat of bacteria of the Leptospira genus, whose survival strongly depends on climatic factors...

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Autores principales: Llop, María José, Gómez, Andrea, Llop, Pamela, López, María Soledad, Müller, Gabriela V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9614762/
https://www.ncbi.nlm.nih.gov/pubmed/36306013
http://dx.doi.org/10.1007/s00484-022-02378-z
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author Llop, María José
Gómez, Andrea
Llop, Pamela
López, María Soledad
Müller, Gabriela V.
author_facet Llop, María José
Gómez, Andrea
Llop, Pamela
López, María Soledad
Müller, Gabriela V.
author_sort Llop, María José
collection PubMed
description Leptospirosis, the infectious disease caused by a spirochete bacteria, is a major public health problem worldwide. In Argentina, some regions have climatic and geographical characteristics that favor the habitat of bacteria of the Leptospira genus, whose survival strongly depends on climatic factors, enhanced by climate change, which increase the problems associated with people’s health. In order to have a method to predict leptospirosis cases, in this paper, five time series forecasting methods are compared: two parametric (autoregressive integrated moving average and an alternative one that allows covariates, ARIMA and ARIMAX, respectively), two nonparametric (Nadaraya-Watson Kernel estimator, one and two kernels versions, NW-1 K and NW-2 K), and one semiparametric (semi-functional partial linear regression, SFPLR) method. For this, the number of cases of leptospirosis registered from 2009 to 2020 in three important cities of northeastern Argentina is used, as well as hydroclimatic covariates related to the presence of cases. According to the obtained results, there is no method that improves considerably the rest and can be recommended as a unique tool for leptospirosis prediction. However, in general, the NW-2 K method gets a better performance. This work, in addition to using a long-term high-quality time series, enriches the area of applications of statistical models to epidemiological leptospirosis data by the incorporation of hydroclimatic variables, and it is recommended directing further efforts in this line of research, under the context of current climate change.
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spelling pubmed-96147622022-10-28 Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models Llop, María José Gómez, Andrea Llop, Pamela López, María Soledad Müller, Gabriela V. Int J Biometeorol Original Paper Leptospirosis, the infectious disease caused by a spirochete bacteria, is a major public health problem worldwide. In Argentina, some regions have climatic and geographical characteristics that favor the habitat of bacteria of the Leptospira genus, whose survival strongly depends on climatic factors, enhanced by climate change, which increase the problems associated with people’s health. In order to have a method to predict leptospirosis cases, in this paper, five time series forecasting methods are compared: two parametric (autoregressive integrated moving average and an alternative one that allows covariates, ARIMA and ARIMAX, respectively), two nonparametric (Nadaraya-Watson Kernel estimator, one and two kernels versions, NW-1 K and NW-2 K), and one semiparametric (semi-functional partial linear regression, SFPLR) method. For this, the number of cases of leptospirosis registered from 2009 to 2020 in three important cities of northeastern Argentina is used, as well as hydroclimatic covariates related to the presence of cases. According to the obtained results, there is no method that improves considerably the rest and can be recommended as a unique tool for leptospirosis prediction. However, in general, the NW-2 K method gets a better performance. This work, in addition to using a long-term high-quality time series, enriches the area of applications of statistical models to epidemiological leptospirosis data by the incorporation of hydroclimatic variables, and it is recommended directing further efforts in this line of research, under the context of current climate change. Springer Berlin Heidelberg 2022-10-28 2022 /pmc/articles/PMC9614762/ /pubmed/36306013 http://dx.doi.org/10.1007/s00484-022-02378-z Text en © The Author(s) under exclusive licence to International Society of Biometeorology 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Paper
Llop, María José
Gómez, Andrea
Llop, Pamela
López, María Soledad
Müller, Gabriela V.
Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title_full Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title_fullStr Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title_full_unstemmed Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title_short Prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
title_sort prediction of leptospirosis outbreaks by hydroclimatic covariates: a comparative study of statistical models
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9614762/
https://www.ncbi.nlm.nih.gov/pubmed/36306013
http://dx.doi.org/10.1007/s00484-022-02378-z
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