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Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI

Perivascular spaces (PVS) are believed to be involved in brain waste disposal. PVS are associated with cerebral small vessel disease. At higher field strengths more PVS can be observed, challenging manual assessment. We developed a method to automatically detect and quantify PVS. A machine learning...

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Autores principales: Spijkerman, J.M., Zwanenburg, J.J.M., Bouvy, W.H., Geerlings, M.I., Biessels, G.J., Hendrikse, J., Luijten, P.R., Kuijf, H.J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9616283/
https://www.ncbi.nlm.nih.gov/pubmed/36324395
http://dx.doi.org/10.1016/j.cccb.2022.100142
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author Spijkerman, J.M.
Zwanenburg, J.J.M.
Bouvy, W.H.
Geerlings, M.I.
Biessels, G.J.
Hendrikse, J.
Luijten, P.R.
Kuijf, H.J.
author_facet Spijkerman, J.M.
Zwanenburg, J.J.M.
Bouvy, W.H.
Geerlings, M.I.
Biessels, G.J.
Hendrikse, J.
Luijten, P.R.
Kuijf, H.J.
author_sort Spijkerman, J.M.
collection PubMed
description Perivascular spaces (PVS) are believed to be involved in brain waste disposal. PVS are associated with cerebral small vessel disease. At higher field strengths more PVS can be observed, challenging manual assessment. We developed a method to automatically detect and quantify PVS. A machine learning approach identified PVS in an automatically positioned ROI in the centrum semiovale (CSO), based on -resolution T2-weighted TSE scans. Next, 3D PVS tracking was performed in 50 subjects (mean age 62.9 years (range 27–78), 19 male), and quantitative measures were extracted. Maps of PVS density, length, and tortuosity were created. Manual PVS annotations were available to train and validate the automatic method. Good correlation was found between the automatic and manual PVS count: ICC (absolute/consistency) is 0.64/0.75, and Dice similarity coefficient (DSC) is 0.61. The automatic method counts fewer PVS than the manual count, because it ignores the smallest PVS (length <2 mm). For 20 subjects manual PVS annotations of a second observer were available. Compared with the correlation between the automatic and manual PVS, higher inter-observer ICC was observed (0.85/0.88), but DSC was lower (0.49 in 4 persons). Longer PVS are observed posterior in the CSO compared with anterior in the CSO. Higher PVS tortuosity are observed in the center of the CSO compared with the periphery of the CSO. Our fully automatic method can detect PVS in a 2D slab in the CSO, and extract quantitative PVS parameters by performing 3D tracking. This method enables automated quantitative analysis of PVS.
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spelling pubmed-96162832022-11-01 Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI Spijkerman, J.M. Zwanenburg, J.J.M. Bouvy, W.H. Geerlings, M.I. Biessels, G.J. Hendrikse, J. Luijten, P.R. Kuijf, H.J. Cereb Circ Cogn Behav Article Perivascular spaces (PVS) are believed to be involved in brain waste disposal. PVS are associated with cerebral small vessel disease. At higher field strengths more PVS can be observed, challenging manual assessment. We developed a method to automatically detect and quantify PVS. A machine learning approach identified PVS in an automatically positioned ROI in the centrum semiovale (CSO), based on -resolution T2-weighted TSE scans. Next, 3D PVS tracking was performed in 50 subjects (mean age 62.9 years (range 27–78), 19 male), and quantitative measures were extracted. Maps of PVS density, length, and tortuosity were created. Manual PVS annotations were available to train and validate the automatic method. Good correlation was found between the automatic and manual PVS count: ICC (absolute/consistency) is 0.64/0.75, and Dice similarity coefficient (DSC) is 0.61. The automatic method counts fewer PVS than the manual count, because it ignores the smallest PVS (length <2 mm). For 20 subjects manual PVS annotations of a second observer were available. Compared with the correlation between the automatic and manual PVS, higher inter-observer ICC was observed (0.85/0.88), but DSC was lower (0.49 in 4 persons). Longer PVS are observed posterior in the CSO compared with anterior in the CSO. Higher PVS tortuosity are observed in the center of the CSO compared with the periphery of the CSO. Our fully automatic method can detect PVS in a 2D slab in the CSO, and extract quantitative PVS parameters by performing 3D tracking. This method enables automated quantitative analysis of PVS. Elsevier 2022-04-05 /pmc/articles/PMC9616283/ /pubmed/36324395 http://dx.doi.org/10.1016/j.cccb.2022.100142 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Spijkerman, J.M.
Zwanenburg, J.J.M.
Bouvy, W.H.
Geerlings, M.I.
Biessels, G.J.
Hendrikse, J.
Luijten, P.R.
Kuijf, H.J.
Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title_full Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title_fullStr Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title_full_unstemmed Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title_short Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI
title_sort automatic quantification of perivascular spaces in t2-weighted images at 7 t mri
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9616283/
https://www.ncbi.nlm.nih.gov/pubmed/36324395
http://dx.doi.org/10.1016/j.cccb.2022.100142
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