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Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia

The COVID-19 epidemic has lasted for more than two years since the outbreak in late 2019. An urgent and challenging question is how to systematically evaluate epidemic developments in different countries, during different periods, and to determine which measures that could be implemented are key for...

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Autores principales: Tu, Han, Wang, Xia, Tang, Sanyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9617800/
https://www.ncbi.nlm.nih.gov/pubmed/36323394
http://dx.doi.org/10.1016/j.jtbi.2022.111336
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author Tu, Han
Wang, Xia
Tang, Sanyi
author_facet Tu, Han
Wang, Xia
Tang, Sanyi
author_sort Tu, Han
collection PubMed
description The COVID-19 epidemic has lasted for more than two years since the outbreak in late 2019. An urgent and challenging question is how to systematically evaluate epidemic developments in different countries, during different periods, and to determine which measures that could be implemented are key for successful epidemic prevention. In this study, SBD distance-based K-shape clustering and hierarchical clustering methods were used to analyse epidemics in Asian countries. For the hierarchical clustering, epidemic time series were divided into three periods (epidemics induced by the Original/Alpha, Delta and Omicron variants separately). Standard deviations, the Hurst index, mortality rates, peak value of confirmed cases per capita, average growth rates, and the control efficiency of each period were used to characterize the epidemics. In addition, the total numbers of cases in the different countries were analysed by correlation and regression in relation to 15 variables that could have impacts on COVID-19. Finally, some suggestions on prevention and control measures for each category of country are given. We found that the total numbers of cases per million of a population, total deaths per million and mortality rates were highly correlated with the proportion of people aged over 65 years, the prevalence of multiple diseases, and the national GDP. We also found significant associations between case numbers and vaccination rates, health expenditures, and stringency of control measures. Vaccinations have played a positive role in COVID-19, with a gradual decline in mortality rates in later periods, and are still playing protective roles against the Delta and Omicron strains. The stringency of control measures taken by a government is not an indicator of the appropriateness of a country's response to the outbreak, and a higher index does not necessarily mean more effective measures; a combination of factors such as national vaccination rates, the country's economic foundation and the availability of medical equipment is also needed. This manuscript was submitted as part of a theme issue on “Modelling COVID-19 and Preparedness for Future Pandemics”.
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spelling pubmed-96178002022-10-31 Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia Tu, Han Wang, Xia Tang, Sanyi J Theor Biol Article The COVID-19 epidemic has lasted for more than two years since the outbreak in late 2019. An urgent and challenging question is how to systematically evaluate epidemic developments in different countries, during different periods, and to determine which measures that could be implemented are key for successful epidemic prevention. In this study, SBD distance-based K-shape clustering and hierarchical clustering methods were used to analyse epidemics in Asian countries. For the hierarchical clustering, epidemic time series were divided into three periods (epidemics induced by the Original/Alpha, Delta and Omicron variants separately). Standard deviations, the Hurst index, mortality rates, peak value of confirmed cases per capita, average growth rates, and the control efficiency of each period were used to characterize the epidemics. In addition, the total numbers of cases in the different countries were analysed by correlation and regression in relation to 15 variables that could have impacts on COVID-19. Finally, some suggestions on prevention and control measures for each category of country are given. We found that the total numbers of cases per million of a population, total deaths per million and mortality rates were highly correlated with the proportion of people aged over 65 years, the prevalence of multiple diseases, and the national GDP. We also found significant associations between case numbers and vaccination rates, health expenditures, and stringency of control measures. Vaccinations have played a positive role in COVID-19, with a gradual decline in mortality rates in later periods, and are still playing protective roles against the Delta and Omicron strains. The stringency of control measures taken by a government is not an indicator of the appropriateness of a country's response to the outbreak, and a higher index does not necessarily mean more effective measures; a combination of factors such as national vaccination rates, the country's economic foundation and the availability of medical equipment is also needed. This manuscript was submitted as part of a theme issue on “Modelling COVID-19 and Preparedness for Future Pandemics”. Elsevier Ltd. 2023-01-21 2022-10-30 /pmc/articles/PMC9617800/ /pubmed/36323394 http://dx.doi.org/10.1016/j.jtbi.2022.111336 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Tu, Han
Wang, Xia
Tang, Sanyi
Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title_full Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title_fullStr Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title_full_unstemmed Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title_short Exploring COVID-19 transmission patterns and key factors during epidemics caused by three major strains in Asia
title_sort exploring covid-19 transmission patterns and key factors during epidemics caused by three major strains in asia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9617800/
https://www.ncbi.nlm.nih.gov/pubmed/36323394
http://dx.doi.org/10.1016/j.jtbi.2022.111336
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