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A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2

OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT...

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Autores principales: Tian, Jing, Chen, Biao, Zhang, Bin, Li, Tantan, Liang, Zhiqiang, Guo, Yujin, Jiao, Huping, Liang, Fenghong, Xiang, Longquan, Lin, Fanzhong, Ren, Ruiwen, Liu, Qingbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9619631/
https://www.ncbi.nlm.nih.gov/pubmed/36200614
http://dx.doi.org/10.1093/labmed/lmac093
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author Tian, Jing
Chen, Biao
Zhang, Bin
Li, Tantan
Liang, Zhiqiang
Guo, Yujin
Jiao, Huping
Liang, Fenghong
Xiang, Longquan
Lin, Fanzhong
Ren, Ruiwen
Liu, Qingbin
author_facet Tian, Jing
Chen, Biao
Zhang, Bin
Li, Tantan
Liang, Zhiqiang
Guo, Yujin
Jiao, Huping
Liang, Fenghong
Xiang, Longquan
Lin, Fanzhong
Ren, Ruiwen
Liu, Qingbin
author_sort Tian, Jing
collection PubMed
description OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT-PCR limits the diagnosis of SARS-CoV-2, development of a quick process of SARS-CoV-2 detection technology with high analytical sensitivity remains urgent. METHODS: We combined isothermal amplification and fluorescence detection technology to develop a new auto-recombinase polymerase amplification (RPA)-fluorescence platform that could be used in the diagnosis of SARS-CoV-2. RESULTS: By optimization of primers and probes, the RPA platform could detect SARS-CoV-2 nucleotides within 15 min. The limits of detection and specificity of the auto-RPA-fluorescence platform were 5 copies/µL and 100%, respectively. The accuracy of detection of the auto-RPA-fluorescence platform in the 16 positive samples was 100%. CONCLUSION: The RPA platform is a potential technology for the diagnosis of SARS-CoV-2 infection.
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spelling pubmed-96196312022-11-04 A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 Tian, Jing Chen, Biao Zhang, Bin Li, Tantan Liang, Zhiqiang Guo, Yujin Jiao, Huping Liang, Fenghong Xiang, Longquan Lin, Fanzhong Ren, Ruiwen Liu, Qingbin Lab Med Science OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT-PCR limits the diagnosis of SARS-CoV-2, development of a quick process of SARS-CoV-2 detection technology with high analytical sensitivity remains urgent. METHODS: We combined isothermal amplification and fluorescence detection technology to develop a new auto-recombinase polymerase amplification (RPA)-fluorescence platform that could be used in the diagnosis of SARS-CoV-2. RESULTS: By optimization of primers and probes, the RPA platform could detect SARS-CoV-2 nucleotides within 15 min. The limits of detection and specificity of the auto-RPA-fluorescence platform were 5 copies/µL and 100%, respectively. The accuracy of detection of the auto-RPA-fluorescence platform in the 16 positive samples was 100%. CONCLUSION: The RPA platform is a potential technology for the diagnosis of SARS-CoV-2 infection. Oxford University Press 2022-10-06 /pmc/articles/PMC9619631/ /pubmed/36200614 http://dx.doi.org/10.1093/labmed/lmac093 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of American Society for Clinical Pathology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Science
Tian, Jing
Chen, Biao
Zhang, Bin
Li, Tantan
Liang, Zhiqiang
Guo, Yujin
Jiao, Huping
Liang, Fenghong
Xiang, Longquan
Lin, Fanzhong
Ren, Ruiwen
Liu, Qingbin
A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title_full A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title_fullStr A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title_full_unstemmed A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title_short A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
title_sort new auto-rpa-fluorescence detection platform for sars-cov-2
topic Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9619631/
https://www.ncbi.nlm.nih.gov/pubmed/36200614
http://dx.doi.org/10.1093/labmed/lmac093
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