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A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2
OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9619631/ https://www.ncbi.nlm.nih.gov/pubmed/36200614 http://dx.doi.org/10.1093/labmed/lmac093 |
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author | Tian, Jing Chen, Biao Zhang, Bin Li, Tantan Liang, Zhiqiang Guo, Yujin Jiao, Huping Liang, Fenghong Xiang, Longquan Lin, Fanzhong Ren, Ruiwen Liu, Qingbin |
author_facet | Tian, Jing Chen, Biao Zhang, Bin Li, Tantan Liang, Zhiqiang Guo, Yujin Jiao, Huping Liang, Fenghong Xiang, Longquan Lin, Fanzhong Ren, Ruiwen Liu, Qingbin |
author_sort | Tian, Jing |
collection | PubMed |
description | OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT-PCR limits the diagnosis of SARS-CoV-2, development of a quick process of SARS-CoV-2 detection technology with high analytical sensitivity remains urgent. METHODS: We combined isothermal amplification and fluorescence detection technology to develop a new auto-recombinase polymerase amplification (RPA)-fluorescence platform that could be used in the diagnosis of SARS-CoV-2. RESULTS: By optimization of primers and probes, the RPA platform could detect SARS-CoV-2 nucleotides within 15 min. The limits of detection and specificity of the auto-RPA-fluorescence platform were 5 copies/µL and 100%, respectively. The accuracy of detection of the auto-RPA-fluorescence platform in the 16 positive samples was 100%. CONCLUSION: The RPA platform is a potential technology for the diagnosis of SARS-CoV-2 infection. |
format | Online Article Text |
id | pubmed-9619631 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-96196312022-11-04 A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 Tian, Jing Chen, Biao Zhang, Bin Li, Tantan Liang, Zhiqiang Guo, Yujin Jiao, Huping Liang, Fenghong Xiang, Longquan Lin, Fanzhong Ren, Ruiwen Liu, Qingbin Lab Med Science OBJECTIVE: The outbreak of COVID-19 caused by SARS-CoV-2 has led to a serious worldwide pandemic. Quantitative reverse transcription–polymerase chain reaction (qRT-PCR)–based methods were recommended for routine detection of SARS-CoV-2 RNA. Because the reaction time and analytical sensitivity of qRT-PCR limits the diagnosis of SARS-CoV-2, development of a quick process of SARS-CoV-2 detection technology with high analytical sensitivity remains urgent. METHODS: We combined isothermal amplification and fluorescence detection technology to develop a new auto-recombinase polymerase amplification (RPA)-fluorescence platform that could be used in the diagnosis of SARS-CoV-2. RESULTS: By optimization of primers and probes, the RPA platform could detect SARS-CoV-2 nucleotides within 15 min. The limits of detection and specificity of the auto-RPA-fluorescence platform were 5 copies/µL and 100%, respectively. The accuracy of detection of the auto-RPA-fluorescence platform in the 16 positive samples was 100%. CONCLUSION: The RPA platform is a potential technology for the diagnosis of SARS-CoV-2 infection. Oxford University Press 2022-10-06 /pmc/articles/PMC9619631/ /pubmed/36200614 http://dx.doi.org/10.1093/labmed/lmac093 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of American Society for Clinical Pathology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Science Tian, Jing Chen, Biao Zhang, Bin Li, Tantan Liang, Zhiqiang Guo, Yujin Jiao, Huping Liang, Fenghong Xiang, Longquan Lin, Fanzhong Ren, Ruiwen Liu, Qingbin A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title | A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title_full | A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title_fullStr | A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title_full_unstemmed | A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title_short | A New Auto-RPA-Fluorescence Detection Platform for SARS-CoV-2 |
title_sort | new auto-rpa-fluorescence detection platform for sars-cov-2 |
topic | Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9619631/ https://www.ncbi.nlm.nih.gov/pubmed/36200614 http://dx.doi.org/10.1093/labmed/lmac093 |
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