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Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma

RAB34 (RAB34, member RAS oncogene family) is aberrantly expressed in various cancers and exhibits oncogenic properties. However, its function in glioma remains largely unclear. In the present study, we collected 697 RNA-seq data from The Cancer Genome Atlas (TCGA) dataset and 325 RNA-seq data from C...

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Detalles Bibliográficos
Autores principales: Hou, Peng, Wan, Quan, Wang, Qing, Wu, Xuechao, Lu, Xiaojie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620491/
https://www.ncbi.nlm.nih.gov/pubmed/36222286
http://dx.doi.org/10.1042/BSR20212624
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author Hou, Peng
Wan, Quan
Wang, Qing
Wu, Xuechao
Lu, Xiaojie
author_facet Hou, Peng
Wan, Quan
Wang, Qing
Wu, Xuechao
Lu, Xiaojie
author_sort Hou, Peng
collection PubMed
description RAB34 (RAB34, member RAS oncogene family) is aberrantly expressed in various cancers and exhibits oncogenic properties. However, its function in glioma remains largely unclear. In the present study, we collected 697 RNA-seq data from The Cancer Genome Atlas (TCGA) dataset and 325 RNA-seq data from Chinese Glioma Genome Atlas (CGGA) dataset. Bioinformatics and PCR analysis showed that RAB34 expression was positively related to the glioma tumor grade and predicted poor outcomes for glioma patients. Additionally, RAB34 expression was significantly up-regulated in classical and mesenchymal subtypes, and isolated diastolic hypertension wild-type gliomas. Moreover, RAB34 expression was remarkably correlated with inflammatory activities, immune infiltration, and immune checkpoints in glioma. In vitro experiments demonstrated that inhibition of RAB34 restrained the growth, migration, as well as invasion of glioma cells, and reversed the epithelial-to-mesenchymal transition (EMT) process. Our findings established RAB34 as a novel progression-related biomarker and a possible immunotherapy target for glioma.
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spelling pubmed-96204912022-11-04 Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma Hou, Peng Wan, Quan Wang, Qing Wu, Xuechao Lu, Xiaojie Biosci Rep Bioinformatics RAB34 (RAB34, member RAS oncogene family) is aberrantly expressed in various cancers and exhibits oncogenic properties. However, its function in glioma remains largely unclear. In the present study, we collected 697 RNA-seq data from The Cancer Genome Atlas (TCGA) dataset and 325 RNA-seq data from Chinese Glioma Genome Atlas (CGGA) dataset. Bioinformatics and PCR analysis showed that RAB34 expression was positively related to the glioma tumor grade and predicted poor outcomes for glioma patients. Additionally, RAB34 expression was significantly up-regulated in classical and mesenchymal subtypes, and isolated diastolic hypertension wild-type gliomas. Moreover, RAB34 expression was remarkably correlated with inflammatory activities, immune infiltration, and immune checkpoints in glioma. In vitro experiments demonstrated that inhibition of RAB34 restrained the growth, migration, as well as invasion of glioma cells, and reversed the epithelial-to-mesenchymal transition (EMT) process. Our findings established RAB34 as a novel progression-related biomarker and a possible immunotherapy target for glioma. Portland Press Ltd. 2022-10-28 /pmc/articles/PMC9620491/ /pubmed/36222286 http://dx.doi.org/10.1042/BSR20212624 Text en © 2022 The Author(s). https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Bioinformatics
Hou, Peng
Wan, Quan
Wang, Qing
Wu, Xuechao
Lu, Xiaojie
Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title_full Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title_fullStr Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title_full_unstemmed Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title_short Overexpression of RAB34 associates with tumor aggressiveness and immune infiltration in glioma
title_sort overexpression of rab34 associates with tumor aggressiveness and immune infiltration in glioma
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620491/
https://www.ncbi.nlm.nih.gov/pubmed/36222286
http://dx.doi.org/10.1042/BSR20212624
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