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The targets of aspirin in bladder cancer: bioinformatics analysis
BACKGROUND: The anti-carcinogenic properties of aspirin have been observed in some solid tumors. However, the molecular mechanism of therapeutic effects of aspirin on bladder cancer is still indistinct. We introduced a bioinformatics analysis approach, to explore the targets of aspirin in bladder ca...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620658/ https://www.ncbi.nlm.nih.gov/pubmed/36316768 http://dx.doi.org/10.1186/s12894-022-01119-z |
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author | Li, Xiao Tai, Yanghao Liu, Shuying Gao, Yating Zhang, Kaining Yin, Jierong Zhang, Huijuan Wang, Xia Li, Xiaofei Zhang, Dongfeng Zhang, Dong-feng |
author_facet | Li, Xiao Tai, Yanghao Liu, Shuying Gao, Yating Zhang, Kaining Yin, Jierong Zhang, Huijuan Wang, Xia Li, Xiaofei Zhang, Dongfeng Zhang, Dong-feng |
author_sort | Li, Xiao |
collection | PubMed |
description | BACKGROUND: The anti-carcinogenic properties of aspirin have been observed in some solid tumors. However, the molecular mechanism of therapeutic effects of aspirin on bladder cancer is still indistinct. We introduced a bioinformatics analysis approach, to explore the targets of aspirin in bladder cancer (BC). METHODS: To find out the potential targets of aspirin in BC, we analyzed direct protein targets (DPTs) of aspirin in Drug Bank 5.0. The protein-protein interaction (PPI) network and signaling pathway of aspirin DPTs were then analyzed subsequently. A detailed analysis of the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway has shown that aspirin is linked to BC. We identified overexpressed genes in BC comparing with normal samples by Oncomine and genes that interlinked with aspirin target genes in BC by STRING. RESULTS: Firstly, we explored 16 direct protein targets (DPT) of aspirin. We analyzed the protein-protein interaction (PPI) network and signaling pathways of aspirin DPT. We found that aspirin is closely associated with a variety of cancers, including BC. Then, we classified mutations in 3 aspirin DPTs (CCND1, MYC and TP53) in BC using the cBio Portal database. In addition, we extracted the top 50 overexpressed genes in bladder cancer by Oncomine and predicted the genes associated with the 3 aspirin DPTs (CCND1, MYC and TP53) in BC by STRING. Finally, 5 exact genes were identified as potential therapeutic targets of aspirin in bladder cancer. CONCLUSION: The analysis of relevant databases will improve our mechanistic understanding of the role of aspirin in bladder cancer. This will guide the direction of our next drug-disease interaction studies. |
format | Online Article Text |
id | pubmed-9620658 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-96206582022-11-01 The targets of aspirin in bladder cancer: bioinformatics analysis Li, Xiao Tai, Yanghao Liu, Shuying Gao, Yating Zhang, Kaining Yin, Jierong Zhang, Huijuan Wang, Xia Li, Xiaofei Zhang, Dongfeng Zhang, Dong-feng BMC Urol Research BACKGROUND: The anti-carcinogenic properties of aspirin have been observed in some solid tumors. However, the molecular mechanism of therapeutic effects of aspirin on bladder cancer is still indistinct. We introduced a bioinformatics analysis approach, to explore the targets of aspirin in bladder cancer (BC). METHODS: To find out the potential targets of aspirin in BC, we analyzed direct protein targets (DPTs) of aspirin in Drug Bank 5.0. The protein-protein interaction (PPI) network and signaling pathway of aspirin DPTs were then analyzed subsequently. A detailed analysis of the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway has shown that aspirin is linked to BC. We identified overexpressed genes in BC comparing with normal samples by Oncomine and genes that interlinked with aspirin target genes in BC by STRING. RESULTS: Firstly, we explored 16 direct protein targets (DPT) of aspirin. We analyzed the protein-protein interaction (PPI) network and signaling pathways of aspirin DPT. We found that aspirin is closely associated with a variety of cancers, including BC. Then, we classified mutations in 3 aspirin DPTs (CCND1, MYC and TP53) in BC using the cBio Portal database. In addition, we extracted the top 50 overexpressed genes in bladder cancer by Oncomine and predicted the genes associated with the 3 aspirin DPTs (CCND1, MYC and TP53) in BC by STRING. Finally, 5 exact genes were identified as potential therapeutic targets of aspirin in bladder cancer. CONCLUSION: The analysis of relevant databases will improve our mechanistic understanding of the role of aspirin in bladder cancer. This will guide the direction of our next drug-disease interaction studies. BioMed Central 2022-10-31 /pmc/articles/PMC9620658/ /pubmed/36316768 http://dx.doi.org/10.1186/s12894-022-01119-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Li, Xiao Tai, Yanghao Liu, Shuying Gao, Yating Zhang, Kaining Yin, Jierong Zhang, Huijuan Wang, Xia Li, Xiaofei Zhang, Dongfeng Zhang, Dong-feng The targets of aspirin in bladder cancer: bioinformatics analysis |
title | The targets of aspirin in bladder cancer: bioinformatics analysis |
title_full | The targets of aspirin in bladder cancer: bioinformatics analysis |
title_fullStr | The targets of aspirin in bladder cancer: bioinformatics analysis |
title_full_unstemmed | The targets of aspirin in bladder cancer: bioinformatics analysis |
title_short | The targets of aspirin in bladder cancer: bioinformatics analysis |
title_sort | targets of aspirin in bladder cancer: bioinformatics analysis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620658/ https://www.ncbi.nlm.nih.gov/pubmed/36316768 http://dx.doi.org/10.1186/s12894-022-01119-z |
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