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Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate
Epidemiological models with constant parameters may not capture satisfactory infection patterns in the presence of pharmaceutical and non-pharmaceutical mitigation measures during a pandemic, since infectiousness is a function of time. In this paper, an Epidemiology-Informed Neural Network algorithm...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620878/ https://www.ncbi.nlm.nih.gov/pubmed/36417211 http://dx.doi.org/10.3390/epidemiologia2040033 |
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author | Olumoyin, K. D. Khaliq, A. Q. M. Furati, K. M. |
author_facet | Olumoyin, K. D. Khaliq, A. Q. M. Furati, K. M. |
author_sort | Olumoyin, K. D. |
collection | PubMed |
description | Epidemiological models with constant parameters may not capture satisfactory infection patterns in the presence of pharmaceutical and non-pharmaceutical mitigation measures during a pandemic, since infectiousness is a function of time. In this paper, an Epidemiology-Informed Neural Network algorithm is introduced to learn the time-varying transmission rate for the COVID-19 pandemic in the presence of various mitigation scenarios. There are asymptomatic infectives, mostly unreported, and the proposed algorithm learns the proportion of the total infective individuals that are asymptomatic infectives. Using cumulative and daily reported cases of the symptomatic infectives, we simulate the impact of non-pharmaceutical mitigation measures such as early detection of infectives, contact tracing, and social distancing on the basic reproduction number. We demonstrate the effectiveness of vaccination on the transmission of COVID-19. The accuracy of the proposed algorithm is demonstrated using error metrics in the data-driven simulation for COVID-19 data of Italy, South Korea, the United Kingdom, and the United States. |
format | Online Article Text |
id | pubmed-9620878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-96208782022-11-18 Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate Olumoyin, K. D. Khaliq, A. Q. M. Furati, K. M. Epidemiologia (Basel) Article Epidemiological models with constant parameters may not capture satisfactory infection patterns in the presence of pharmaceutical and non-pharmaceutical mitigation measures during a pandemic, since infectiousness is a function of time. In this paper, an Epidemiology-Informed Neural Network algorithm is introduced to learn the time-varying transmission rate for the COVID-19 pandemic in the presence of various mitigation scenarios. There are asymptomatic infectives, mostly unreported, and the proposed algorithm learns the proportion of the total infective individuals that are asymptomatic infectives. Using cumulative and daily reported cases of the symptomatic infectives, we simulate the impact of non-pharmaceutical mitigation measures such as early detection of infectives, contact tracing, and social distancing on the basic reproduction number. We demonstrate the effectiveness of vaccination on the transmission of COVID-19. The accuracy of the proposed algorithm is demonstrated using error metrics in the data-driven simulation for COVID-19 data of Italy, South Korea, the United Kingdom, and the United States. MDPI 2021-09-24 /pmc/articles/PMC9620878/ /pubmed/36417211 http://dx.doi.org/10.3390/epidemiologia2040033 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Olumoyin, K. D. Khaliq, A. Q. M. Furati, K. M. Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title | Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title_full | Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title_fullStr | Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title_full_unstemmed | Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title_short | Data-Driven Deep-Learning Algorithm for Asymptomatic COVID-19 Model with Varying Mitigation Measures and Transmission Rate |
title_sort | data-driven deep-learning algorithm for asymptomatic covid-19 model with varying mitigation measures and transmission rate |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9620878/ https://www.ncbi.nlm.nih.gov/pubmed/36417211 http://dx.doi.org/10.3390/epidemiologia2040033 |
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