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The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)

To better understand the diversity and phylogeny of Nemouridae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Nemoura longicercia Okamoto, 1922. The entire mitochondrial genome of N. longicercia was 15,728 bp. It contained 37 representative genes (22 transfer RNA genes...

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Autores principales: Gao, Shuo, Wang, Guochang, Wang, Xuan, Yuan, Hao, Wang, Ying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621250/
https://www.ncbi.nlm.nih.gov/pubmed/36325293
http://dx.doi.org/10.1080/23802359.2022.2135397
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author Gao, Shuo
Wang, Guochang
Wang, Xuan
Yuan, Hao
Wang, Ying
author_facet Gao, Shuo
Wang, Guochang
Wang, Xuan
Yuan, Hao
Wang, Ying
author_sort Gao, Shuo
collection PubMed
description To better understand the diversity and phylogeny of Nemouridae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Nemoura longicercia Okamoto, 1922. The entire mitochondrial genome of N. longicercia was 15,728 bp. It contained 37 representative genes (22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), and two ribosomal RNA genes (rRNAs)) and a control region. In this genome, 23 genes were found on the heavy strand (H-strand) and 14 genes were on the light strand (L-strand). All PCGs began with the initiation codon ATN. Eleven PCGs stopped with the termination codon TAA or TAG, while COII and ND5 genes stopped with incomplete codon T. Bayesian’s inference (BI) and maximum-likelihood (ML) methods generated the identical tree topology across the PCGR dataset (13 PCGs plus two rRNAs). The monophyly of each subfamily was well-supported. This analysis supported the clade N. longicercia plus N. papilla as sister taxon to the clade N. meniscata plus N. nankinensis.
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spelling pubmed-96212502022-11-01 The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae) Gao, Shuo Wang, Guochang Wang, Xuan Yuan, Hao Wang, Ying Mitochondrial DNA B Resour Mitogenome Announcement To better understand the diversity and phylogeny of Nemouridae, we sequenced and annotated the complete mitochondrial genome (mitogenome) of Nemoura longicercia Okamoto, 1922. The entire mitochondrial genome of N. longicercia was 15,728 bp. It contained 37 representative genes (22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), and two ribosomal RNA genes (rRNAs)) and a control region. In this genome, 23 genes were found on the heavy strand (H-strand) and 14 genes were on the light strand (L-strand). All PCGs began with the initiation codon ATN. Eleven PCGs stopped with the termination codon TAA or TAG, while COII and ND5 genes stopped with incomplete codon T. Bayesian’s inference (BI) and maximum-likelihood (ML) methods generated the identical tree topology across the PCGR dataset (13 PCGs plus two rRNAs). The monophyly of each subfamily was well-supported. This analysis supported the clade N. longicercia plus N. papilla as sister taxon to the clade N. meniscata plus N. nankinensis. Taylor & Francis 2022-10-27 /pmc/articles/PMC9621250/ /pubmed/36325293 http://dx.doi.org/10.1080/23802359.2022.2135397 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gao, Shuo
Wang, Guochang
Wang, Xuan
Yuan, Hao
Wang, Ying
The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title_full The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title_fullStr The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title_full_unstemmed The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title_short The mitochondrial genome analysis of a stonefly, Nemoura longicercia Okamoto, 1922 (Plecoptera: Nemouridae)
title_sort mitochondrial genome analysis of a stonefly, nemoura longicercia okamoto, 1922 (plecoptera: nemouridae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621250/
https://www.ncbi.nlm.nih.gov/pubmed/36325293
http://dx.doi.org/10.1080/23802359.2022.2135397
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