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EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer
OBJECTIVE: The poor prognosis and heterogeneity of stage III colon cancer (CC) suggest the need for more prognostic biomarkers. The tumor microenvironment (TME) plays a crucial role in tumor progression. We aimed to explore novel immune infiltration-associated molecules that serve as potential progn...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623419/ https://www.ncbi.nlm.nih.gov/pubmed/36330510 http://dx.doi.org/10.3389/fimmu.2022.987394 |
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author | Wang, Xitao Cheng, Wei Zeng, Xingzhi Dou, Xiaolin Zhou, Zhongyi Pei, Qian |
author_facet | Wang, Xitao Cheng, Wei Zeng, Xingzhi Dou, Xiaolin Zhou, Zhongyi Pei, Qian |
author_sort | Wang, Xitao |
collection | PubMed |
description | OBJECTIVE: The poor prognosis and heterogeneity of stage III colon cancer (CC) suggest the need for more prognostic biomarkers. The tumor microenvironment (TME) plays a crucial role in tumor progression. We aimed to explore novel immune infiltration-associated molecules that serve as potential prognostic and therapeutic targets. METHODS: TME immune scores were calculated using “TMEscore” algorithm. Differentially expressed genes between the high and low TME immune score groups were identified and further investigated through a protein-protein interaction network and the Molecular Complex Detection algorithm. Cox regression, meta-analysis and immunohistochemistry were applied to identify genes significantly correlated with relapse-free survival (RFS). We estimated immune infiltration using three different algorithms (TIMER 2.0, CIBERSORTx, and TIDE). Single-cell sequencing data were processed by Seurat software. RESULTS: Poor RFS was observed in the low TME immune score groups (log-rank P < 0.05). EPSTI1 was demonstrated to be significantly correlated with RFS (P < 0.05) in stage III CC. Meta-analysis comprising 547 patients revealed that EPSTI1 was a protective factor (HR = 0.79, 95% CI, 0.65-0. 96; P < 0.05)). More immune infiltrates were observed in the high EPSTI1 group, especially M1 macrophage and myeloid dendritic cell infiltration (P < 0.05). CONCLUSION: The TME immune score is positively associated with better survival outcomes. EPSTI1 could serve as a novel immune prognostic biomarker for stage III CC. |
format | Online Article Text |
id | pubmed-9623419 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96234192022-11-02 EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer Wang, Xitao Cheng, Wei Zeng, Xingzhi Dou, Xiaolin Zhou, Zhongyi Pei, Qian Front Immunol Immunology OBJECTIVE: The poor prognosis and heterogeneity of stage III colon cancer (CC) suggest the need for more prognostic biomarkers. The tumor microenvironment (TME) plays a crucial role in tumor progression. We aimed to explore novel immune infiltration-associated molecules that serve as potential prognostic and therapeutic targets. METHODS: TME immune scores were calculated using “TMEscore” algorithm. Differentially expressed genes between the high and low TME immune score groups were identified and further investigated through a protein-protein interaction network and the Molecular Complex Detection algorithm. Cox regression, meta-analysis and immunohistochemistry were applied to identify genes significantly correlated with relapse-free survival (RFS). We estimated immune infiltration using three different algorithms (TIMER 2.0, CIBERSORTx, and TIDE). Single-cell sequencing data were processed by Seurat software. RESULTS: Poor RFS was observed in the low TME immune score groups (log-rank P < 0.05). EPSTI1 was demonstrated to be significantly correlated with RFS (P < 0.05) in stage III CC. Meta-analysis comprising 547 patients revealed that EPSTI1 was a protective factor (HR = 0.79, 95% CI, 0.65-0. 96; P < 0.05)). More immune infiltrates were observed in the high EPSTI1 group, especially M1 macrophage and myeloid dendritic cell infiltration (P < 0.05). CONCLUSION: The TME immune score is positively associated with better survival outcomes. EPSTI1 could serve as a novel immune prognostic biomarker for stage III CC. Frontiers Media S.A. 2022-10-18 /pmc/articles/PMC9623419/ /pubmed/36330510 http://dx.doi.org/10.3389/fimmu.2022.987394 Text en Copyright © 2022 Wang, Cheng, Zeng, Dou, Zhou and Pei https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Wang, Xitao Cheng, Wei Zeng, Xingzhi Dou, Xiaolin Zhou, Zhongyi Pei, Qian EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title | EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title_full | EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title_fullStr | EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title_full_unstemmed | EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title_short | EPSTI1 as an immune biomarker predicts the prognosis of patients with stage III colon cancer |
title_sort | epsti1 as an immune biomarker predicts the prognosis of patients with stage iii colon cancer |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623419/ https://www.ncbi.nlm.nih.gov/pubmed/36330510 http://dx.doi.org/10.3389/fimmu.2022.987394 |
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