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GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions

Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we de...

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Detalles Bibliográficos
Autores principales: Réthi‐Nagy, Zsuzsánna, Ábrahám, Edit, Lipinszki, Zoltán
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623517/
https://www.ncbi.nlm.nih.gov/pubmed/36102272
http://dx.doi.org/10.1002/2211-5463.13485
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author Réthi‐Nagy, Zsuzsánna
Ábrahám, Edit
Lipinszki, Zoltán
author_facet Réthi‐Nagy, Zsuzsánna
Ábrahám, Edit
Lipinszki, Zoltán
author_sort Réthi‐Nagy, Zsuzsánna
collection PubMed
description Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we describe a fast and versatile research protocol that is suitable for the in vitro analysis of the physical interaction between proteins or for mapping the binding surfaces. The principle of this method is based on the immobilisation of the protein/domain of interest to a carrier followed by its incubation with a labelled putative binding partner, which is generated by a coupled in vitro transcription/translation reaction. Interacting proteins are removed from the carrier, fractionated and visualised by SDS/PAGE autoradiography (or western blotting). This simple and cheap method can be easily carried out in every wet lab.
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spelling pubmed-96235172022-11-02 GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions Réthi‐Nagy, Zsuzsánna Ábrahám, Edit Lipinszki, Zoltán FEBS Open Bio Research Protocol Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we describe a fast and versatile research protocol that is suitable for the in vitro analysis of the physical interaction between proteins or for mapping the binding surfaces. The principle of this method is based on the immobilisation of the protein/domain of interest to a carrier followed by its incubation with a labelled putative binding partner, which is generated by a coupled in vitro transcription/translation reaction. Interacting proteins are removed from the carrier, fractionated and visualised by SDS/PAGE autoradiography (or western blotting). This simple and cheap method can be easily carried out in every wet lab. John Wiley and Sons Inc. 2022-09-22 /pmc/articles/PMC9623517/ /pubmed/36102272 http://dx.doi.org/10.1002/2211-5463.13485 Text en © 2022 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Protocol
Réthi‐Nagy, Zsuzsánna
Ábrahám, Edit
Lipinszki, Zoltán
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title_full GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title_fullStr GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title_full_unstemmed GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title_short GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
title_sort gst‐ivtt pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
topic Research Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623517/
https://www.ncbi.nlm.nih.gov/pubmed/36102272
http://dx.doi.org/10.1002/2211-5463.13485
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