Cargando…
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions
Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we de...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623517/ https://www.ncbi.nlm.nih.gov/pubmed/36102272 http://dx.doi.org/10.1002/2211-5463.13485 |
_version_ | 1784822013862346752 |
---|---|
author | Réthi‐Nagy, Zsuzsánna Ábrahám, Edit Lipinszki, Zoltán |
author_facet | Réthi‐Nagy, Zsuzsánna Ábrahám, Edit Lipinszki, Zoltán |
author_sort | Réthi‐Nagy, Zsuzsánna |
collection | PubMed |
description | Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we describe a fast and versatile research protocol that is suitable for the in vitro analysis of the physical interaction between proteins or for mapping the binding surfaces. The principle of this method is based on the immobilisation of the protein/domain of interest to a carrier followed by its incubation with a labelled putative binding partner, which is generated by a coupled in vitro transcription/translation reaction. Interacting proteins are removed from the carrier, fractionated and visualised by SDS/PAGE autoradiography (or western blotting). This simple and cheap method can be easily carried out in every wet lab. |
format | Online Article Text |
id | pubmed-9623517 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96235172022-11-02 GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions Réthi‐Nagy, Zsuzsánna Ábrahám, Edit Lipinszki, Zoltán FEBS Open Bio Research Protocol Over the past few decades, dozens of in vitro methods have been developed to map, investigate and validate protein–protein interactions. However, most of these approaches are time‐consuming and labour‐intensive or require specialised equipment or substantial amounts of purified proteins. Here, we describe a fast and versatile research protocol that is suitable for the in vitro analysis of the physical interaction between proteins or for mapping the binding surfaces. The principle of this method is based on the immobilisation of the protein/domain of interest to a carrier followed by its incubation with a labelled putative binding partner, which is generated by a coupled in vitro transcription/translation reaction. Interacting proteins are removed from the carrier, fractionated and visualised by SDS/PAGE autoradiography (or western blotting). This simple and cheap method can be easily carried out in every wet lab. John Wiley and Sons Inc. 2022-09-22 /pmc/articles/PMC9623517/ /pubmed/36102272 http://dx.doi.org/10.1002/2211-5463.13485 Text en © 2022 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Protocol Réthi‐Nagy, Zsuzsánna Ábrahám, Edit Lipinszki, Zoltán GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title |
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title_full |
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title_fullStr |
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title_full_unstemmed |
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title_short |
GST‐IVTT pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
title_sort | gst‐ivtt pull‐down: a fast and versatile in vitro method for validating and mapping protein–protein interactions |
topic | Research Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9623517/ https://www.ncbi.nlm.nih.gov/pubmed/36102272 http://dx.doi.org/10.1002/2211-5463.13485 |
work_keys_str_mv | AT rethinagyzsuzsanna gstivttpulldownafastandversatileinvitromethodforvalidatingandmappingproteinproteininteractions AT abrahamedit gstivttpulldownafastandversatileinvitromethodforvalidatingandmappingproteinproteininteractions AT lipinszkizoltan gstivttpulldownafastandversatileinvitromethodforvalidatingandmappingproteinproteininteractions |