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Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking
Gastric cancer has emerged as a key challenge in oncology research as a malignant tumour with advanced stage detection. Apart from surgical management, a pharmacotherapeutic approach to stomach cancer treatment is an appealing option to consider. Andrographolide has been shown to have anticancer and...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626486/ https://www.ncbi.nlm.nih.gov/pubmed/36319798 http://dx.doi.org/10.1038/s41598-022-18319-0 |
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author | Yadav, Ravi Prakash Sadhukhan, Susanta Saha, Makhan Lal Ghosh, Sudakshina Das, Madhusudan |
author_facet | Yadav, Ravi Prakash Sadhukhan, Susanta Saha, Makhan Lal Ghosh, Sudakshina Das, Madhusudan |
author_sort | Yadav, Ravi Prakash |
collection | PubMed |
description | Gastric cancer has emerged as a key challenge in oncology research as a malignant tumour with advanced stage detection. Apart from surgical management, a pharmacotherapeutic approach to stomach cancer treatment is an appealing option to consider. Andrographolide has been shown to have anticancer and chemosensitizer properties in a variety of solid tumors, including stomach cancer but the exact molecular mechanism is skeptical. In this study, we identified and validated pharmacological mechanism involved in the treatment of GC with integrated approach of network pharmacology and molecular docking. The targets of andrographolide and GC were obtained from databases. The intersected targets between andrographolide and GC-related genes were used to construct protein–protein interaction (PPI) network. Furthermore, mechanism of action of the targets was predicted by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses. Finally, these results were validated by molecular docking experiments, mRNA and protein expression level. A total of 197 targets were obtained for andrographolide treating GC. Functional enrichment analysis revealed that the target genes were exerted promising therapeutic effects on GC by HIF-1 and PI3K-Akt signaling pathway. The possible mechanism of action is by inactivation of HIF-1 signaling pathway which is dependent on the inhibition of upstream PI3K-AKT pathway. The PPI network identified SRC, AKT1, TP53, STAT3, PIK3CA, MAPK1, MAPK3, VEGFA, JUN and HSP90AA1 as potential hub targets. In addition, these results were further validated with molecular docking experiments. Survival analysis indicated that the expression levels of the hub genes were significantly associated with the clinical prognosis of GC. This study provided a novel approach to reveal the therapeutic mechanisms of andrographolide on GC, making future clinical application of andrographolide in the treatment of GC. |
format | Online Article Text |
id | pubmed-9626486 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-96264862022-11-03 Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking Yadav, Ravi Prakash Sadhukhan, Susanta Saha, Makhan Lal Ghosh, Sudakshina Das, Madhusudan Sci Rep Article Gastric cancer has emerged as a key challenge in oncology research as a malignant tumour with advanced stage detection. Apart from surgical management, a pharmacotherapeutic approach to stomach cancer treatment is an appealing option to consider. Andrographolide has been shown to have anticancer and chemosensitizer properties in a variety of solid tumors, including stomach cancer but the exact molecular mechanism is skeptical. In this study, we identified and validated pharmacological mechanism involved in the treatment of GC with integrated approach of network pharmacology and molecular docking. The targets of andrographolide and GC were obtained from databases. The intersected targets between andrographolide and GC-related genes were used to construct protein–protein interaction (PPI) network. Furthermore, mechanism of action of the targets was predicted by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses. Finally, these results were validated by molecular docking experiments, mRNA and protein expression level. A total of 197 targets were obtained for andrographolide treating GC. Functional enrichment analysis revealed that the target genes were exerted promising therapeutic effects on GC by HIF-1 and PI3K-Akt signaling pathway. The possible mechanism of action is by inactivation of HIF-1 signaling pathway which is dependent on the inhibition of upstream PI3K-AKT pathway. The PPI network identified SRC, AKT1, TP53, STAT3, PIK3CA, MAPK1, MAPK3, VEGFA, JUN and HSP90AA1 as potential hub targets. In addition, these results were further validated with molecular docking experiments. Survival analysis indicated that the expression levels of the hub genes were significantly associated with the clinical prognosis of GC. This study provided a novel approach to reveal the therapeutic mechanisms of andrographolide on GC, making future clinical application of andrographolide in the treatment of GC. Nature Publishing Group UK 2022-11-01 /pmc/articles/PMC9626486/ /pubmed/36319798 http://dx.doi.org/10.1038/s41598-022-18319-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Yadav, Ravi Prakash Sadhukhan, Susanta Saha, Makhan Lal Ghosh, Sudakshina Das, Madhusudan Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title | Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title_full | Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title_fullStr | Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title_full_unstemmed | Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title_short | Exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
title_sort | exploring the mechanism of andrographolide in the treatment of gastric cancer through network pharmacology and molecular docking |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626486/ https://www.ncbi.nlm.nih.gov/pubmed/36319798 http://dx.doi.org/10.1038/s41598-022-18319-0 |
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