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MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity
Adrenomyeloneuropathy (AMN), the slow progressive phenotype of adrenoleukodystrophy (ALD), has no clinical plasma biomarker for disease progression. This feasibility study aimed to determine whether metabolomics and micro‐RNA in blood plasma provide a potential source of biomarkers for AMN disease s...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626672/ https://www.ncbi.nlm.nih.gov/pubmed/36341174 http://dx.doi.org/10.1002/jmd2.12323 |
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author | Turk, Bela Rui Poisson, Laila Marie Nemeth, Christina Linnea Goodman, Jordan Moser, Ann B. Jones, Richard Owen Fatemi, Ali Singh, Jaspreet |
author_facet | Turk, Bela Rui Poisson, Laila Marie Nemeth, Christina Linnea Goodman, Jordan Moser, Ann B. Jones, Richard Owen Fatemi, Ali Singh, Jaspreet |
author_sort | Turk, Bela Rui |
collection | PubMed |
description | Adrenomyeloneuropathy (AMN), the slow progressive phenotype of adrenoleukodystrophy (ALD), has no clinical plasma biomarker for disease progression. This feasibility study aimed to determine whether metabolomics and micro‐RNA in blood plasma provide a potential source of biomarkers for AMN disease severity. Metabolomics and RNA‐seq were performed on AMN and healthy human blood plasma. Biomarker discovery and pathway analyses were performed using clustering, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and regression against patient's clinical Expanded Disability Status Score (EDSS). Fourteen AMN and six healthy control samples were analyzed. AMN showed strong disease‐severity‐specific metabolic and miRNA clustering signatures. Strong, significant clinical correlations were shown for 7‐alpha‐hydroxy‐3‐oxo‐4‐cholestenoate (7‐HOCA) (r (2) = 0.83, p < 0.00001), dehydroepiandrosterone sulfate (DHEA‐S; r (2) = 0.82, p < 0.00001), hypoxanthine (r (2) = 0.82, p < 0.00001), as well as miRNA‐432‐5p (r (2) = 0.68, p < 0.00001). KEGG pathway comparison of mild versus severe disease identified affected downstream systems: GAREM, IGF‐1, CALCRL, SMAD2&3, glutathione peroxidase, LDH, and NOS. This feasibility study demonstrates that miRNA and metabolomics are a source of potential plasma biomarkers for disease severity in AMN, providing both a disease signature and individual markers with strong clinical correlations. Network analyses of affected systems implicate differentially altered vascular, inflammatory, and oxidative stress pathways, suggesting disease‐severity‐specific mechanisms as a function of disease severity. |
format | Online Article Text |
id | pubmed-9626672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96266722022-11-03 MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity Turk, Bela Rui Poisson, Laila Marie Nemeth, Christina Linnea Goodman, Jordan Moser, Ann B. Jones, Richard Owen Fatemi, Ali Singh, Jaspreet JIMD Rep Research Reports Adrenomyeloneuropathy (AMN), the slow progressive phenotype of adrenoleukodystrophy (ALD), has no clinical plasma biomarker for disease progression. This feasibility study aimed to determine whether metabolomics and micro‐RNA in blood plasma provide a potential source of biomarkers for AMN disease severity. Metabolomics and RNA‐seq were performed on AMN and healthy human blood plasma. Biomarker discovery and pathway analyses were performed using clustering, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and regression against patient's clinical Expanded Disability Status Score (EDSS). Fourteen AMN and six healthy control samples were analyzed. AMN showed strong disease‐severity‐specific metabolic and miRNA clustering signatures. Strong, significant clinical correlations were shown for 7‐alpha‐hydroxy‐3‐oxo‐4‐cholestenoate (7‐HOCA) (r (2) = 0.83, p < 0.00001), dehydroepiandrosterone sulfate (DHEA‐S; r (2) = 0.82, p < 0.00001), hypoxanthine (r (2) = 0.82, p < 0.00001), as well as miRNA‐432‐5p (r (2) = 0.68, p < 0.00001). KEGG pathway comparison of mild versus severe disease identified affected downstream systems: GAREM, IGF‐1, CALCRL, SMAD2&3, glutathione peroxidase, LDH, and NOS. This feasibility study demonstrates that miRNA and metabolomics are a source of potential plasma biomarkers for disease severity in AMN, providing both a disease signature and individual markers with strong clinical correlations. Network analyses of affected systems implicate differentially altered vascular, inflammatory, and oxidative stress pathways, suggesting disease‐severity‐specific mechanisms as a function of disease severity. John Wiley & Sons, Inc. 2022-08-22 /pmc/articles/PMC9626672/ /pubmed/36341174 http://dx.doi.org/10.1002/jmd2.12323 Text en © 2022 The Authors. JIMD Reports published by John Wiley & Sons Ltd on behalf of SSIEM. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Reports Turk, Bela Rui Poisson, Laila Marie Nemeth, Christina Linnea Goodman, Jordan Moser, Ann B. Jones, Richard Owen Fatemi, Ali Singh, Jaspreet MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title |
MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title_full |
MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title_fullStr |
MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title_full_unstemmed |
MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title_short |
MicroRNA and metabolomics signatures for adrenomyeloneuropathy disease severity |
title_sort | microrna and metabolomics signatures for adrenomyeloneuropathy disease severity |
topic | Research Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626672/ https://www.ncbi.nlm.nih.gov/pubmed/36341174 http://dx.doi.org/10.1002/jmd2.12323 |
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